RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CPEB1Q9BZB8 566 aaKnown RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 SCO2O43819 266 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 KLK3P07288 261 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 SSX9Q7RTT3 188 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 C12orf45Q8N5I9 185 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 DNAAF1Q8NEP3 725 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 OR5AR1Q8NGP9 310 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 OR4K13Q8NH42 304 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 ZNF578Q96N58 590 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 TXNL4BQ9NX01 149 aaKnown RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 CBY1Q9Y3M2 126 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 RNF215Q9Y6U7 377 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 A0A1W2PS29 197 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 MEIOCA2RUB1 952 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 PROS1P07225 676 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 ADORA3P0DMS8 318 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 RPS5P46782 204 aaKnown RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 TMPRSS9Q7Z410 1059 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 DEFB119Q8N690 84 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 OR5AK2Q8NH90 309 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 NEIL2Q969S2 332 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 WDR77Q9BQA1 342 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 PITHD1Q9GZP4 211 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 PPP4R1LQ9P1A2 415 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 C5AR2Q9P296 337 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 A0A1B0GV50 99 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 TCRBV5S1A1TA0A578 114 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 APBB3O95704 486 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 EIF2DP41214 584 aaKnown RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 SELPLGQ14242 412 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 TMEM225Q6GV28 225 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 PDZD3Q86UT5 571 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 ZNF808Q8N4W9 903 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 TMEM102Q8N9M5 508 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 MMP28Q9H239 520 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 HHATLQ9HCP6 504 aa13.4□□□□□ -0.26
LMX1B-202ENST00000373474 ZNF223Q9UK11 482 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 TRPM3Q9HCF6 1732 aaPredicted RBP13.4□□□□□ -0.26
LMX1B-202ENST00000373474 MEGF11A6BM72 1044 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 PRSS3P35030 304 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 PIN1Q13526 163 aaPredicted RBP13.39□□□□□ -0.27
LMX1B-202ENST00000373474 ELOAQ14241 798 aaKnown RBP13.39□□□□□ -0.27
LMX1B-202ENST00000373474 NNATQ16517 81 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 MAVSQ7Z434 540 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 NAXEQ8NCW5 288 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 PXYLP1Q8TE99 480 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 MED30Q96HR3 178 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 OR1A2Q9Y585 309 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 C7orf72A4D263 438 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 FAM221BA6H8Z2 402 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 MAGEB1P43366 347 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 RAB40BQ12829 278 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 SLC18B1Q6NT16 456 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 P4HA3Q7Z4N8 544 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 TMEM150AQ86TG1 271 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 OR2M2Q96R28 347 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 ZNF416Q9BWM5 594 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 DPH1Q9BZG8 443 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 CNIH4Q9P003 139 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 SCAF4O95104 1147 aaKnown RBP13.39□□□□□ -0.27
LMX1B-202ENST00000373474 CFIP05156 583 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 ALPLP05186 524 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 SNRNP70P08621 437 aaKnown RBP13.39□□□□□ -0.27
LMX1B-202ENST00000373474 SIM1P81133 766 aaPredicted RBP13.39□□□□□ -0.27
LMX1B-202ENST00000373474 RIN1Q13671 783 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 GPR19Q15760 415 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 FIGLAQ6QHK4 219 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 GTF2H4Q92759 462 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 UBXN10Q96LJ8 280 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 WASH6PQ9NQA3 447 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 CLDN24A6NM45 220 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 ACOT7O00154 380 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 OR7A17O14581 309 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 TRAPPC6AO75865 159 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 AKAIN1P0CW23 69 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 SHC2P98077 582 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 BTN1A1Q13410 526 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 PCGF3Q3KNV8 242 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 CLVS2Q5SYC1 327 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 KIAA1211LQ6NV74 962 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 HSD11B1LQ7Z5J1 315 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 OR2T4Q8NH00 348 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 SLC22A8Q8TCC7 542 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 DAZLQ92904 295 aaKnown RBP13.39□□□□□ -0.27
LMX1B-202ENST00000373474 TSACCQ96A04 125 aaPredicted RBP13.39□□□□□ -0.27
LMX1B-202ENST00000373474 ELP4Q96EB1 424 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 SHDQ96IW2 340 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 PRRC1Q96M27 445 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 HOXD1Q9GZZ0 328 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 PLCXD1Q9NUJ7 323 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 LAMB1P07942 1786 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 SCGB1D1O95968 90 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 CAPNS1P04632 268 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 SLC10A3P09131 477 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 DRD5P21918 477 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 ZNF84P51523 738 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 DOK4Q8TEW6 326 aa13.39□□□□□ -0.27
LMX1B-202ENST00000373474 SPRYD4Q8WW59 207 aaPredicted RBP13.39□□□□□ -0.27
LMX1B-202ENST00000373474 SLC38A1Q9H2H9 487 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms