RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CCDC116Q8IYX3 515 aa14.46□□□□□ -0.09
COL5A1-201ENST00000371817 CNOT2Q9NZN8 540 aaKnown RBP14.46□□□□□ -0.09
COL5A1-201ENST00000371817 F3P13726 295 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 S100A7P31151 101 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 SNU13P55769 128 aaKnown RBP14.46□□□□□ -0.1
COL5A1-201ENST00000371817 PMPCAQ10713 525 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 AGTRAPQ6RW13 159 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 C1orf127Q8N9H9 656 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 OR5D14Q8NGL3 314 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 NPRL2Q8WTW4 380 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 ADAMTS14Q8WXS8 1223 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 KCNK13Q9HB14 408 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 GAR1Q9NY12 217 aaKnown RBP14.46□□□□□ -0.1
COL5A1-201ENST00000371817 LDB2O43679 373 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 KDELC1Q6UW63 502 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 ADIPOR2Q86V24 386 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 GCDHQ92947 438 aaPredicted RBP14.46□□□□□ -0.1
COL5A1-201ENST00000371817 HIPK2Q9H2X6 1198 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 IL20RAQ9UHF4 553 aa14.46□□□□□ -0.1
COL5A1-201ENST00000371817 PTTG1IPP53801 180 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 MLLT11Q13015 90 aaPredicted RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 LEG1Q6P5S2 330 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 REEP6Q96HR9 211 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 GABRA3P34903 492 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 OR4D2P58180 307 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 C21orf62-AS1Q17RA5 79 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 ACSM3Q53FZ2 586 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 B3GNT9Q6UX72 402 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 C4orf32Q8N8J7 132 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 TRMT2BQ96GJ1 504 aaKnown RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 NFATC1O95644 943 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 EGFP01133 1207 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 ALDOAP04075 364 aaKnown RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 KIAA1024LP59773 190 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 PLGLB1Q02325 96 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 ARHGAP40Q5TG30 622 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 LAX1Q8IWV1 398 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 OR9A1PQ8NGU1 263 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 OR52P1PQ8NH57 321 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 SPOCK3Q9BQ16 436 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 SAP130Q9H0E3 1048 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 SLC5A2P31639 672 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 HEPHL1Q6MZM0 1159 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 TPRA1Q86W33 373 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 MCATQ8IVS2 390 aaKnown RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 ZNF768Q9H5H4 540 aaKnown RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 OSGIN1Q9UJX0 560 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 CEP170BQ9Y4F5 1589 aaPredicted RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 MROH6A6NGR9 719 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 DDOSTP39656 456 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 BRAT1Q6PJG6 821 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 ZNF561Q8N587 486 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 RPL10LQ96L21 214 aaKnown RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 NIFKQ9BYG3 293 aaKnown RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 TOLLIPQ9H0E2 274 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 CRTAC1Q9NQ79 661 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 MC3RP41968 323 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 DAOAP59103 153 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 SLC25A11Q02978 314 aaKnown RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 PLGLAQ15195 96 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 DPH2Q9BQC3 489 aaPredicted RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 MPPED1O15442 326 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 KCNE1P15382 129 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 ZNF239Q16600 458 aaKnown RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 GRAMD2AQ8IUY3 354 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 SLC35F2Q8IXU6 374 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 SPTSSAQ969W0 71 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 KAZALD1Q96I82 304 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.45□□□□□ -0.1
COL5A1-201ENST00000371817 ERCC6L2Q5T890 1561 aa14.45□□□□□ -0.1
COL5A1-201ENST00000371817 SLC43A1O75387 559 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 MPIG6BO95866 241 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 ZNF43P17038 809 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 ACTBL2Q562R1 376 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 TECRLQ5HYJ1 363 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 SLC5A8Q8N695 610 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 SPRYD4Q8WW59 207 aaPredicted RBP14.44□□□□□ -0.1
COL5A1-201ENST00000371817 MUL1Q969V5 352 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 TBC1D20Q96BZ9 403 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 GSX2Q9BZM3 304 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 IL36AQ9UHA7 158 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 RCE1Q9Y256 329 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 USP31Q70CQ4 1352 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 PNMTP11086 282 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 DPEP1P16444 411 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 CLCNKAP51800 687 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 MSMO1Q15800 293 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 ZBTB44Q8NCP5 570 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 GGHQ92820 318 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 TDP1Q9NUW8 608 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 ARL2-SNX15V9GYD0 113 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 C9J4A7 227 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 SLC31A1O15431 190 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 ZIC2O95409 532 aaPredicted RBP14.44□□□□□ -0.1
COL5A1-201ENST00000371817 BMP4P12644 408 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 USF1P22415 310 aaPredicted RBP14.44□□□□□ -0.1
COL5A1-201ENST00000371817 TIA1P31483 386 aaKnown RBP eCLIP14.44□□□□□ -0.1
COL5A1-201ENST00000371817 CLRN3Q8NCR9 226 aa14.44□□□□□ -0.1
COL5A1-201ENST00000371817 KPTNQ9Y664 436 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms