RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 C9orf43Q8TAL5 461 aaPredicted RBP10.92□□□□□ -0.66
PDE6C-201ENST00000371447 BAHD1Q8TBE0 780 aaPredicted RBP10.92□□□□□ -0.66
PDE6C-201ENST00000371447 SFXN5Q8TD22 340 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 FOXQ1Q9C009 403 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 CNOT2Q9NZN8 540 aaKnown RBP10.92□□□□□ -0.66
PDE6C-201ENST00000371447 PSMD9O00233 223 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 CASKO14936 926 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 GPR75O95800 540 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 BMP7P18075 431 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 SNRPGP62308 76 aaKnown RBP10.92□□□□□ -0.66
PDE6C-201ENST00000371447 TIMM50Q3ZCQ8 353 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 OTPQ5XKR4 325 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 SLC36A4Q6YBV0 504 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 LYSMD2Q8IV50 215 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 KIAA1958Q8N8K9 716 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 Q8N9G6 341 aaPredicted RBP10.92□□□□□ -0.66
PDE6C-201ENST00000371447 ACOT11Q8WXI4 607 aaPredicted RBP10.92□□□□□ -0.66
PDE6C-201ENST00000371447 NEURL2Q9BR09 285 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 ISG20L2Q9H9L3 353 aaKnown RBP10.92□□□□□ -0.66
PDE6C-201ENST00000371447 LMAN1LQ9HAT1 526 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 HINT3Q9NQE9 182 aaKnown RBP10.92□□□□□ -0.66
PDE6C-201ENST00000371447 CALML5Q9NZT1 146 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 PILRAQ9UKJ1 303 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 ACAD8Q9UKU7 415 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 MMP17Q9ULZ9 603 aa10.92□□□□□ -0.66
PDE6C-201ENST00000371447 A6NCN8 305 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 PRR19A6NJB7 356 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 PRAMEF26H0Y7S4 382 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 CSF2P04141 144 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 SCG5P05408 212 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 PAICSP22234 425 aaKnown RBP10.91□□□□□ -0.66
PDE6C-201ENST00000371447 OMPP47874 163 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 OR1D4P47884 311 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 DESI1Q6ICB0 168 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 MCATQ8IVS2 390 aaKnown RBP10.91□□□□□ -0.66
PDE6C-201ENST00000371447 PRR22Q8IZ63 422 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 VWA5B2Q8N398 1253 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 NANOGP1Q8N7R0 232 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 SMRP1Q8NCR6 262 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 TMEM163Q8TC26 289 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 EFHD2Q96C19 240 aaPredicted RBP10.91□□□□□ -0.66
PDE6C-201ENST00000371447 POLDIP3Q9BY77 421 aaKnown RBP10.91□□□□□ -0.66
PDE6C-201ENST00000371447 OR52D1Q9H346 318 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 FBXO8Q9NRD0 319 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 RP1P56715 2156 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 A0A0J9YY10 115 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 KCNJ13O60928 360 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 UPK1BO75841 260 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 MRPS21P82921 87 aaKnown RBP10.91□□□□□ -0.66
PDE6C-201ENST00000371447 BNC1Q01954 994 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 COX10Q12887 443 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 TSPAN31Q12999 210 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 NIPAL1Q6NVV3 410 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 FAM131AQ6UXB0 335 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 RANBP3LQ86VV4 465 aaPredicted RBP10.91□□□□□ -0.66
PDE6C-201ENST00000371447 CELF2-AS1Q8N7Q2 184 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 FANK1Q8TC84 345 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 DIRAS2Q96HU8 199 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 ZNF559Q9BR84 538 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 CCDC86Q9H6F5 360 aaKnown RBP10.91□□□□□ -0.66
PDE6C-201ENST00000371447 SYNDIG1Q9H7V2 258 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 MUTYHQ9UIF7 546 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 POU2F3Q9UKI9 436 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 CFL2Q9Y281 166 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 PCDHGB6Q9Y5F9 930 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 FANCMQ8IYD8 2048 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 ADAM11O75078 769 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 SDHBP21912 280 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 TEAD1P28347 426 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 GRPRP30550 384 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 EMDP50402 254 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 POU6F2P78424 691 aaPredicted RBP10.91□□□□□ -0.66
PDE6C-201ENST00000371447 CDK5Q00535 292 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 RPTNQ6XPR3 784 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 TMEM184AQ6ZMB5 413 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 THSD4Q6ZMP0 1018 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 OR2L13Q8N349 312 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 ARL14Q8N4G2 192 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 ZNF655Q8N720 491 aaPredicted RBP10.91□□□□□ -0.66
PDE6C-201ENST00000371447 SPRYD4Q8WW59 207 aaPredicted RBP10.91□□□□□ -0.66
PDE6C-201ENST00000371447 RIT1Q92963 219 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 MROQ9BYG7 248 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 UBQLN3Q9H347 655 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 PNO1Q9NRX1 252 aaKnown RBP10.91□□□□□ -0.66
PDE6C-201ENST00000371447 TXNL4BQ9NX01 149 aaKnown RBP10.91□□□□□ -0.66
PDE6C-201ENST00000371447 ERVK-19Q9WJR5 959 aa10.91□□□□□ -0.66
PDE6C-201ENST00000371447 MUC22E2RYF6 1773 aaPredicted RBP10.9□□□□□ -0.66
PDE6C-201ENST00000371447 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.9□□□□□ -0.66
PDE6C-201ENST00000371447 SPTY2D1-AS1A0A0U1RR47 76 aa10.9□□□□□ -0.66
PDE6C-201ENST00000371447 PRODHO43272 600 aa10.9□□□□□ -0.66
PDE6C-201ENST00000371447 GALR3O60755 368 aaPredicted RBP10.9□□□□□ -0.66
PDE6C-201ENST00000371447 TMCC2O75069 709 aa10.9□□□□□ -0.66
PDE6C-201ENST00000371447 GSTM3P21266 225 aa10.9□□□□□ -0.66
PDE6C-201ENST00000371447 CRYBB2P43320 205 aa10.9□□□□□ -0.66
PDE6C-201ENST00000371447 SLC15A1P46059 708 aa10.9□□□□□ -0.66
PDE6C-201ENST00000371447 RABIFP47224 123 aa10.9□□□□□ -0.66
PDE6C-201ENST00000371447 CSNK1EP49674 416 aaKnown RBP10.9□□□□□ -0.66
PDE6C-201ENST00000371447 FAM53BQ14153 422 aa10.9□□□□□ -0.66
PDE6C-201ENST00000371447 RNASE12Q5GAN4 147 aaKnown RBP10.9□□□□□ -0.66
PDE6C-201ENST00000371447 FAM27D1Q5T7N8 215 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms