RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ZNF682O95780 498 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 HPXP02790 462 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 C8orf89P0DMQ9 161 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 RNH1P13489 461 aaKnown RBP8.12□□□□□ -1.11
TPM3-213ENST00000368545 PORP16435 677 aaPredicted RBP8.12□□□□□ -1.11
TPM3-213ENST00000368545 EGR1P18146 543 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 FSTP19883 344 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 CSF2RBP32927 897 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 FEN1P39748 380 aaKnown RBP8.12□□□□□ -1.11
TPM3-213ENST00000368545 XKP51811 444 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 AQP4P55087 323 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 ERVFRD-1P60508 538 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 OLR1P78380 273 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 EEF1A2Q05639 463 aaKnown RBP8.12□□□□□ -1.11
TPM3-213ENST00000368545 GNA13Q14344 377 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 FAM214AQ32MH5 1076 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 CRB2Q5IJ48 1285 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 TMEM200BQ69YZ2 307 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 REEP3Q6NUK4 255 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 SZRD1Q7Z422 152 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 PATL1Q86TB9 770 aaKnown RBP8.12□□□□□ -1.11
TPM3-213ENST00000368545 WFDC3Q8IUB2 231 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 HORMAD2Q8N7B1 307 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 FAM86B1Q8N7N1 296 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 Q8N9G6 341 aaPredicted RBP8.12□□□□□ -1.11
TPM3-213ENST00000368545 EXD3Q8N9H8 876 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 OR9A4Q8NGU2 314 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 NFKBIDQ8NI38 313 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 FAM110BQ8TC76 370 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 LZICQ8WZA0 190 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 MAL2Q969L2 176 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 B3GNT4Q9C0J1 378 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 Q9H521 79 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 FANCEQ9HB96 536 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 NTMQ9P121 344 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 PTGFRNQ9P2B2 879 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 APC2O95996 2303 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 SPTA1P02549 2419 aa8.12□□□□□ -1.11
TPM3-213ENST00000368545 C5orf58C9J3I9 102 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 SGK494L7N484 410 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 PLOD2O00469 737 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 DNAJB5O75953 348 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 PRSS23O95084 383 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 CST1P01037 141 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 SEMG1P04279 462 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 ATP1B1P05026 303 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 CPMP14384 443 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 KRT20P35900 424 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 CLCN2P51788 898 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 CASP6P55212 293 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 FOLH1Q04609 750 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 C16orf72Q14CZ0 275 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 CLPPQ16740 277 aaPredicted RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 PLEKHN1Q494U1 663 aaPredicted RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 SFT2D3Q587I9 215 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 FHL5Q5TD97 284 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 TNFAIP8L2Q6P589 184 aaPredicted RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 TMEM71Q6P5X7 295 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 TMEM107Q6UX40 140 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 ZBTB49Q6ZSB9 765 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 CXXC5Q7LFL8 322 aaKnown RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 ZNF595Q8IYB9 648 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 LGI4Q8N135 537 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 OR9A2Q8NGT5 310 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 RASSF5Q8WWW0 418 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 ELP4Q96EB1 424 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 MS4A4EQ96PG1 132 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 CIB1Q99828 191 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 DOHHQ9BU89 302 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 C11orf54Q9H0W9 315 aaPredicted RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 SEPSECSQ9HD40 501 aaKnown RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 IL1RAPQ9NPH3 570 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 DDX18Q9NVP1 670 aaKnown RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 DNAJB9Q9UBS3 223 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 RAB26Q9ULW5 256 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 RP1P56715 2156 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 UNC13CQ8NB66 2214 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 A0A0A6YYC8 382 aaPredicted RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 LY6G6EA0A0G2JKS1 128 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 A0A0G2JNJ9 132 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 WASHC1A8K0Z3 465 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 TMEM150CB9EJG8 249 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 F5H0A9 414 aaPredicted RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 I3L1I5 382 aaPredicted RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 HMGN4O00479 90 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 FOXS1O43638 330 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 AHCYL1O43865 530 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 B4GALT2O60909 372 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 OR2B3O76000 313 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 GPR75O95800 540 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 FABP3P05413 133 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 BCHEP06276 602 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 ANKRD34CP0C6C1 535 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 ZNF26P17031 533 aaPredicted RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 NELFEP18615 380 aaKnown RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 BTF3P20290 206 aaKnown RBP8.11□□□□□ -1.11
TPM3-213ENST00000368545 MATN1P21941 496 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 MC3RP41968 323 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 CASP9P55211 416 aa8.11□□□□□ -1.11
TPM3-213ENST00000368545 UCP3P55916 312 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms