RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 ZBP1Q9H171 429 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 SLC25A18Q9H1K4 315 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 MRPS30Q9NP92 439 aaKnown RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 HINT3Q9NQE9 182 aaKnown RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 MAN2C1Q9NTJ4 1040 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 C20orf141Q9NUB4 165 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 CNOT2Q9NZN8 540 aaKnown RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 GTF2A1LQ9UNN4 478 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 MTCL1Q9Y4B5 1905 aaKnown RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 MDC1Q14676 2089 aaKnown RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 SSNA1O43805 119 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 DOK2O60496 412 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 AIFM1O95831 613 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 MT-ND4P03905 459 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 ALPPP05187 535 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 SNRPBP14678 240 aaKnown RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 POU3F3P20264 500 aaPredicted RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 LIMS1P48059 325 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 E2F1Q01094 437 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 RHAGQ02094 409 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 MLLT11Q13015 90 aaPredicted RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 SLC25A35Q3KQZ1 300 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TP53I3Q53FA7 332 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 PXDC1Q5TGL8 231 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 FAM111BQ6SJ93 734 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 METAP1DQ6UB28 335 aaPredicted RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 DCUN1D3Q8IWE4 304 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TBC1D19Q8N5T2 526 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 RFLNBQ8N5W9 214 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 ZNF671Q8TAW3 534 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 ZMYND19Q96E35 227 aaPredicted RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 PTCHD1Q96NR3 888 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 ZNF717Q9BY31 904 aaPredicted RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 NXF2Q9GZY0 626 aaKnown RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 SLC25A19Q9HC21 320 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TMEM74BQ9NUR3 256 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 LUZP4Q9P127 313 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 ENOPH1Q9UHY7 261 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 LSM2Q9Y333 95 aaKnown RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 AK6Q9Y3D8 172 aaKnown RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 INSL6Q9Y581 213 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 PLXNA2O75051 1894 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TBC1D3DA0A087WVF3 549 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TBC1D3IA0A087WXS9 549 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TBC1D3EA0A087X179 549 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TBC1D3KA0A087X1G2 549 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 FAM172BPA6NC97 362 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TBC1D3FA6NER0 549 aaPredicted RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 TBC1D3LB9A6J9 549 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 AKAP8O43823 692 aaKnown RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 RASGRP1O95267 797 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TBC1D3HP0C7X1 549 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TALDO1P37837 337 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 CCR4P51679 360 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 OR12D2P58182 307 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 VSX2P58304 361 aaPredicted RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 TMEM240Q5SV17 173 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TBC1D3GQ6DHY5 549 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TBC1D3CQ6IPX1 549 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 SLC36A4Q6YBV0 504 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 Q7L0L9 218 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 CEACAM19Q7Z692 300 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 UBE3DQ7Z6J8 389 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 TBC1D3Q8IZP1 549 aaPredicted RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 OR4D9Q8NGE8 314 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 OR6K6Q8NGW6 343 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 PATE1Q8WXA2 126 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 OR7D2Q96RA2 312 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 DPCDQ9BVM2 203 aaPredicted RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 GSDMCQ9BYG8 508 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 NEUROD4Q9HD90 331 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 SLC23A1Q9UHI7 598 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 PPIEQ9UNP9 301 aaKnown RBP8.29□□□□□ -1.08
THBS3-201ENST00000368378 FLVCR2Q9UPI3 526 aa8.29□□□□□ -1.08
THBS3-201ENST00000368378 PRRC2CQ9Y520 2896 aaKnown RBP8.28□□□□□ -1.08
THBS3-201ENST00000368378 MEIS3P1A6NDR6 274 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 I3L521 148 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 MOSPD3O75425 235 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 PRNPP04156 253 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 SRPRAP08240 638 aaKnown RBP8.28□□□□□ -1.08
THBS3-201ENST00000368378 CPMP14384 443 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 ARSBP15848 533 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 GIFP27352 417 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 P2RY2P41231 377 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 PXNP49023 591 aaPredicted RBP8.28□□□□□ -1.08
THBS3-201ENST00000368378 HMGA2P52926 109 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 TAS2R38P59533 333 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 FUT5Q11128 374 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 ZNF267Q14586 743 aaPredicted RBP8.28□□□□□ -1.08
THBS3-201ENST00000368378 NDUFAF6Q330K2 333 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 TRMT12Q53H54 448 aaKnown RBP8.28□□□□□ -1.08
THBS3-201ENST00000368378 CFAP161Q6P656 301 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 LILRA6Q6PI73 481 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 CHMP1BQ7LBR1 199 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 NR2C2APQ86WQ0 139 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 HDDC3Q8N4P3 179 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 OR4M1Q8NGD0 313 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 OR5T3Q8NGG3 340 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 OR13C2Q8NGS9 318 aa8.28□□□□□ -1.08
THBS3-201ENST00000368378 PIGXQ8TBF5 258 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms