RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RPS6KB2Q9UBS0 482 aa17.42■□□□□ 0.38
SCARF1-202ENST00000348987 UBXN7O94888 489 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 NTN1O95631 604 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 FGF2P09038 288 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 LAG3P18627 525 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 PRMT2P55345 433 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 RAG2P55895 527 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 NTHL1P78549 312 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 MESP2Q0VG99 397 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 ZNF697Q5TEC3 545 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 HACD4Q5VWC8 232 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 SLC30A6Q6NXT4 461 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 PRSS45Q7RTY3 260 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 BVESQ8NE79 360 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 VN1R2Q8NFZ6 395 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 THAP4Q8WY91 577 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 HERVK_113Q902F9 699 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 CNOT9Q92600 299 aaKnown RBP17.41■□□□□ 0.38
SCARF1-202ENST00000348987 ATOH1Q92858 354 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-202ENST00000348987 WDR89Q96FK6 387 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-202ENST00000348987 SPHK2Q9NRA0 654 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 MED9Q9NWA0 146 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 CHST2Q9Y4C5 530 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 PLSCR5A0PG75 271 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 PTP4A3O75365 173 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 ELFN1P0C7U0 828 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 XPAP23025 273 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-202ENST00000348987 MAPK9P45984 424 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 SIM1P81133 766 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-202ENST00000348987 SYPL1Q16563 259 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 SEZ6L2Q6UXD5 910 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 DMRTA2Q96SC8 542 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 SMAD5Q99717 465 aaKnown RBP17.41■□□□□ 0.38
SCARF1-202ENST00000348987 PELOQ9BRX2 385 aaKnown RBP17.41■□□□□ 0.38
SCARF1-202ENST00000348987 ZBP1Q9H171 429 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 TTYH1Q9H313 450 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-202ENST00000348987 ZCCHC4Q9H5U6 513 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 IFT22Q9H7X7 185 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 DDX31Q9H8H2 851 aaKnown RBP17.41■□□□□ 0.38
SCARF1-202ENST00000348987 MYNNQ9NPC7 610 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 KLHL1Q9NR64 748 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 ING1Q9UK53 422 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-202ENST00000348987 EYSQ5T1H1 3165 aa17.41■□□□□ 0.38
SCARF1-202ENST00000348987 TRABD2BA6NFA1 517 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 ANXA2P2A6NMY6 339 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 HMGN4O00479 90 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 PEX14O75381 377 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 CBX7O95931 251 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 C4BPBP20851 252 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 TBXA2RP21731 343 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 IKBIPQ70UQ0 350 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 CLRN3Q8NCR9 226 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 OR6T1Q8NGN1 323 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 KCTD12Q96CX2 325 aaKnown RBP17.4■□□□□ 0.38
SCARF1-202ENST00000348987 PAWRQ96IZ0 340 aaKnown RBP17.4■□□□□ 0.38
SCARF1-202ENST00000348987 IL17FQ96PD4 163 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 FCRL4Q96PJ5 515 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 TREX2Q9BQ50 279 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-202ENST00000348987 DMRT3Q9NQL9 472 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 CA10Q9NS85 328 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 GPR160Q9UJ42 338 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 DNASE2O00115 360 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-202ENST00000348987 B4GALT2O60909 372 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 NFYAP23511 347 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-202ENST00000348987 RPL3P39023 403 aaKnown RBP17.4■□□□□ 0.38
SCARF1-202ENST00000348987 RPL35P42766 123 aaKnown RBP17.4■□□□□ 0.38
SCARF1-202ENST00000348987 LSRQ86X29 649 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-202ENST00000348987 OR52N1Q8NH53 320 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 OR51Q1Q8NH59 317 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 NEURL3Q96EH8 262 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 ZNF607Q96SK3 696 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 FAM83CQ9BQN1 747 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 ACTR6Q9GZN1 396 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 OR2AG1Q9H205 316 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 IL20RAQ9UHF4 553 aa17.4■□□□□ 0.38
SCARF1-202ENST00000348987 A0A0B4J203 849 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 OR5K4A6NMS3 321 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 MOSPD3O75425 235 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 LDOC1O95751 146 aaPredicted RBP17.39■□□□□ 0.37
SCARF1-202ENST00000348987 CLTBP09497 229 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 VEGFCP49767 419 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 MMP15P51511 669 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 AKR1D1P51857 326 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 EPHA4P54764 986 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 PARS2Q7L3T8 475 aaKnown RBP17.39■□□□□ 0.37
SCARF1-202ENST00000348987 C6orf120Q7Z4R8 191 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 TRAPPC5Q8IUR0 188 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 SIRT6Q8N6T7 355 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 RFKQ969G6 155 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 TIFAQ96CG3 184 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 TBX5Q99593 518 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 FAIM2Q9BWQ8 316 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 GSDMCQ9BYG8 508 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 ABCG4Q9H172 646 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 TDP1Q9NUW8 608 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 MGAT4CQ9UBM8 478 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 IL36AQ9UHA7 158 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 CHURC1-FNTBB4DL54 471 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 ZNF197O14709 1029 aa17.39■□□□□ 0.37
SCARF1-202ENST00000348987 MAZP56270 477 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms