RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SHC2P98077 582 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 EEF1A2Q05639 463 aaKnown RBP12.35□□□□□ -0.43
HLCS-201ENST00000336648 HMGN3Q15651 99 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 LANCL3Q6ZV70 420 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 TTLL10Q6ZVT0 673 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 FAM109AQ8N4B1 249 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 OR1S1Q8NH92 325 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 ST7LQ8TDW4 575 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 PXYLP1Q8TE99 480 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 PAQR8Q8TEZ7 354 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 MSI2Q96DH6 328 aaKnown RBP12.35□□□□□ -0.43
HLCS-201ENST00000336648 ZBED3Q96IU2 234 aaPredicted RBP12.35□□□□□ -0.43
HLCS-201ENST00000336648 BTF3L4Q96K17 158 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 CASD1Q96PB1 797 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 GPR174Q9BXC1 333 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 OR10A5Q9H207 317 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 OR10A2Q9H208 303 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 SOX17Q9H6I2 414 aaPredicted RBP12.35□□□□□ -0.43
HLCS-201ENST00000336648 ZNF736B4DX44 427 aaPredicted RBP12.35□□□□□ -0.43
HLCS-201ENST00000336648 TMX2-CTNND1H3BSU7 103 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 LILRB3O75022 631 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 SNAI1O95863 264 aaPredicted RBP12.35□□□□□ -0.43
HLCS-201ENST00000336648 ZDHHC11BP0C7U3 371 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 ITGAMP11215 1152 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 SH3BP2P78314 561 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 RUNX3Q13761 415 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 KIR2DS3Q14952 304 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 IRF4Q15306 451 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 FNDC9Q8TBE3 224 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 ZFAND1Q8TCF1 268 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 CHTF18Q8WVB6 975 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 COG8Q96MW5 612 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 IL17FQ96PD4 163 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 BTBD2Q9BX70 525 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 KCNK12Q9HB15 430 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 APLNRP35414 380 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 HHEXQ03014 270 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 NADSYN1Q6IA69 706 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 C15orf39Q6ZRI6 1047 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 CDHR3Q6ZTQ4 885 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 RTL10Q7L3V2 364 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 VASH1Q7L8A9 365 aaPredicted RBP12.35□□□□□ -0.43
HLCS-201ENST00000336648 ABHD11Q8NFV4 315 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 OR52B6Q8NGF0 335 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 ZNF300Q96RE9 604 aaPredicted RBP12.35□□□□□ -0.43
HLCS-201ENST00000336648 PAPOLGQ9BWT3 736 aaKnown RBP12.35□□□□□ -0.43
HLCS-201ENST00000336648 BCAS3Q9H6U6 928 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 ZBTB20Q9HC78 741 aaPredicted RBP12.35□□□□□ -0.43
HLCS-201ENST00000336648 IGSF5Q9NSI5 407 aa12.35□□□□□ -0.43
HLCS-201ENST00000336648 ANGPTL7O43827 346 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 PKLRP30613 574 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 DCTP40126 519 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 ERVPABLB-1P60509 514 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 TRAPPC6BQ86SZ2 158 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 SAMD8Q96LT4 415 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 FAM53CQ9NYF3 392 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 ENPP5Q9UJA9 477 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 SRPK3Q9UPE1 567 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 FEZF1A0PJY2 475 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 MPPED1O15442 326 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 NUPL2O15504 423 aaKnown RBP12.34□□□□□ -0.43
HLCS-201ENST00000336648 B3GALNT1O75752 331 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 DSC1Q08554 894 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 CDK5R2Q13319 367 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 RAB33AQ14088 237 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 ZNF791Q3KP31 576 aaPredicted RBP12.34□□□□□ -0.43
HLCS-201ENST00000336648 EEF1A1P5Q5VTE0 462 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 USP51Q70EK9 711 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 TAS1R3Q7RTX0 852 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 MRPL21Q7Z2W9 205 aaKnown RBP12.34□□□□□ -0.43
HLCS-201ENST00000336648 OR14L1PQ8NHC6 308 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 PRRC1Q96M27 445 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 MFFQ9GZY8 342 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 LHPPQ9H008 270 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 PCDHGA7Q9Y5G6 932 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 NME4O00746 187 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 PPP1R3DO95685 299 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 TNFSF4P23510 183 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 RPS26P62854 115 aaKnown RBP12.34□□□□□ -0.43
HLCS-201ENST00000336648 SLC10A2Q12908 348 aaPredicted RBP12.34□□□□□ -0.43
HLCS-201ENST00000336648 SLC7A5P1Q8MH63 180 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 ZNF160Q9HCG1 818 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 LAMTOR5O43504 91 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 GRPRP30550 384 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 GCH1P30793 250 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 INHBCP55103 352 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 MAMDC4Q6UXC1 1216 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 CLECL1Q8IZS7 167 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 SLC2A12Q8TD20 617 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 C16orf70Q9BSU1 422 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 ANKRD30BLA7E2S9 258 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 CD300LBA8K4G0 201 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 FADS1O60427 444 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 CRTAPO75718 401 aaPredicted RBP12.34□□□□□ -0.43
HLCS-201ENST00000336648 PROS1P07225 676 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 PTNP21246 168 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 EPHA1P21709 976 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 CPOXP36551 454 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 ABHD17BQ5VST6 288 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 RANBP10Q6VN20 620 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms