RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 TSPAN31Q12999 210 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 RBM39Q14498 530 aaKnown RBP8.08□□□□□ -1.12
TDP1-201ENST00000335725 NKAIN1Q4KMZ8 207 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
TDP1-201ENST00000335725 ARMC12Q5T9G4 340 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 TBC1D3CQ6IPX1 549 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 PXKQ7Z7A4 578 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 KCNMB4Q86W47 210 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 UNC93AQ86WB7 457 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 MFSD6LQ8IWD5 586 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 TBC1D3Q8IZP1 549 aaPredicted RBP8.08□□□□□ -1.12
TDP1-201ENST00000335725 PROKR2Q8NFJ6 384 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 OR52P1PQ8NH57 321 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 MYLIPQ8WY64 445 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 TFGQ92734 400 aaPredicted RBP8.08□□□□□ -1.12
TDP1-201ENST00000335725 BOD1Q96IK1 185 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 CLUHP3Q96NS8 147 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 FIZ1Q96SL8 496 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 ZNF382Q96SR6 550 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 ACTL8Q9H568 366 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 NMNAT1Q9HAN9 279 aaPredicted RBP8.08□□□□□ -1.12
TDP1-201ENST00000335725 PRMT7Q9NVM4 692 aaPredicted RBP8.08□□□□□ -1.12
TDP1-201ENST00000335725 ARAP2Q8WZ64 1704 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 TEX13DA0A0J9YY54 714 aaPredicted RBP8.08□□□□□ -1.12
TDP1-201ENST00000335725 SMIM22K7EJ46 135 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 MASP2O00187 686 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 CYR61O00622 381 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 AZIN1O14977 448 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 OGG1O15527 345 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 PRODHO43272 600 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 EEF1E1O43324 174 aaKnown RBP8.08□□□□□ -1.12
TDP1-201ENST00000335725 GMFGO60234 142 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 ENDOD1O94919 500 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 STAG3L3P0CL85 134 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 CCR5P51681 352 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 AKR1C2P52895 323 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 AKR1C1Q04828 323 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 SLC5A12Q1EHB4 618 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 CARD16Q5EG05 197 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 KIAA1161Q6NSJ0 714 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 CXXC5Q7LFL8 322 aaKnown RBP8.08□□□□□ -1.12
TDP1-201ENST00000335725 LAPTM4BQ86VI4 370 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 FAM26EQ8N5C1 309 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 ECHDC3Q96DC8 303 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 PIWIL1Q96J94 861 aaKnown RBP8.08□□□□□ -1.12
TDP1-201ENST00000335725 ZIC5Q96T25 663 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 SMOQ99835 787 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 C20orf85Q9H1P6 137 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 ABHD16BQ9H3Z7 469 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 RPS10P5Q9NQ39 176 aa8.08□□□□□ -1.12
TDP1-201ENST00000335725 SLC5A10A0PJK1 596 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 UBE2QL1A1L167 161 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 A8MT66 165 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 NPIPA7E9PJI5 369 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 FARS2O95363 451 aaKnown RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 HPXP02790 462 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 FABP3P05413 133 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 NPIPA8P0DM63 369 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 AVPR2P30518 371 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 RFX3P48380 749 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 PNLIPRP2P54317 469 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 GTF2H2Q13888 395 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 NKPD1Q17RQ9 610 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 C10orf120Q5SQS8 335 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 APOBEC3HQ6NTF7 200 aaKnown RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 GTF2H2CQ6P1K8 395 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 GGT6Q6P531 493 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 TMEM270Q6UE05 265 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 OR2W3Q7Z3T1 314 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 WDR53Q7Z5U6 358 aaPredicted RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 LRRTM1Q86UE6 522 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 ZNF573Q86YE8 665 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 SLC41A1Q8IVJ1 513 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 BAP18Q8IXM2 172 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 ZNF687Q8N1G0 1237 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 PGBD5Q8N414 524 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 HLA-CQ95604 372 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 FCRL5Q96RD9 977 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 ATF6BQ99941 703 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 VPS25Q9BRG1 176 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 PCGF1Q9BSM1 259 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 RIOK2Q9BVS4 552 aaKnown RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 CHST11Q9NPF2 352 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 UTS2RQ9UKP6 389 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 MTCH2Q9Y6C9 303 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 PRR36Q9H6K5 1346 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 SERTM1A2A2V5 107 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 OR2W5A6NFC9 320 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 SNRPGP15A8MWD9 76 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 H7C417 338 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 NPC1O15118 1278 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 TLR5O60602 858 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 F12P00748 615 aaPredicted RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 ERCC1P07992 297 aaPredicted RBP8.07□□□□□ -1.12
TDP1-201ENST00000335725 GABRR1P24046 479 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 ACKR3P25106 362 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 NDUFV1P49821 464 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 DAOAP59103 153 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 MAXP61244 160 aa8.07□□□□□ -1.12
TDP1-201ENST00000335725 HTRA3P83110 453 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms