RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 KIRREL2Q6UWL6 708 aa8.79□□□□□ -1
C11orf54-201ENST00000331239 HSDL2Q6YN16 418 aa8.79□□□□□ -1
C11orf54-201ENST00000331239 EIF3MQ7L2H7 374 aaKnown RBP8.79□□□□□ -1
C11orf54-201ENST00000331239 VTCN1Q7Z7D3 282 aa8.79□□□□□ -1
C11orf54-201ENST00000331239 OR11G2Q8NGC1 345 aa8.79□□□□□ -1
C11orf54-201ENST00000331239 OR52R1Q8NGF1 315 aa8.79□□□□□ -1
C11orf54-201ENST00000331239 LCORQ96JN0 433 aaPredicted RBP8.79□□□□□ -1
C11orf54-201ENST00000331239 AKIRIN1Q9H9L7 192 aaPredicted RBP8.79□□□□□ -1
C11orf54-201ENST00000331239 Q9N2J8 555 aa8.79□□□□□ -1
C11orf54-201ENST00000331239 KIF17Q9P2E2 1029 aa8.79□□□□□ -1
C11orf54-201ENST00000331239 ERVK-19Q9WJR5 959 aa8.79□□□□□ -1
C11orf54-201ENST00000331239 SAMHD1Q9Y3Z3 626 aaKnown RBP8.79□□□□□ -1
C11orf54-201ENST00000331239 PCDHGB1Q9Y5G3 927 aa8.79□□□□□ -1
C11orf54-201ENST00000331239 SCN2AQ99250 2005 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 CCDC88CQ9P219 2028 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 NSG1A0A0A6YYJ2 146 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 TMEM8BA6NDV4 472 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 ZNF99A8MXY4 864 aaPredicted RBP8.78□□□□□ -1
C11orf54-201ENST00000331239 HMGN4O00479 90 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 BCAS1O75363 584 aaPredicted RBP8.78□□□□□ -1
C11orf54-201ENST00000331239 CT62P0C5K7 136 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 ZNF12P17014 697 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 CRATP43155 626 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 DAPP51397 102 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 CRISP3P54108 245 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 SPCS2Q15005 226 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 CRB2Q5IJ48 1285 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 HLA-DQA1Q5Y7H0 255 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 CBLL1Q75N03 491 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 KRT73Q86Y46 540 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 ANKRD13BQ86YJ7 626 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 TAGAPQ8N103 731 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 FAR1Q8WVX9 515 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 ADIPOR1Q96A54 375 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 OR7D2Q96RA2 312 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 ZNF607Q96SK3 696 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 APOL4Q9BPW4 351 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 SCNM1Q9BWG6 230 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 OR51I1Q9H343 314 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 REEP1Q9H902 201 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 MTHFD2LQ9H903 347 aaPredicted RBP8.78□□□□□ -1
C11orf54-201ENST00000331239 KLK13Q9UKR3 277 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 TPRKBQ9Y3C4 175 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 GMPPBQ9Y5P6 360 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 C2orf92A0A1B0GVN3 265 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 DIRAS1O95057 198 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 GABARAPO95166 117 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 FMO3P31513 532 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 CLK3P49761 638 aaKnown RBP8.78□□□□□ -1
C11orf54-201ENST00000331239 EFNA3P52797 238 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 UCNP55089 124 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 NRG3P56975 720 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 CXCR4P61073 352 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 CDK6Q00534 326 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 AIMP2Q13155 320 aaKnown RBP8.78□□□□□ -1
C11orf54-201ENST00000331239 TMEM81Q6P7N7 255 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 DGAT2L6Q6ZPD8 337 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 MRGPREQ86SM8 312 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 ZNF554Q86TJ5 538 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 ZSCAN1Q8NBB4 408 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 APCDD1LQ8NCL9 501 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 C16orf52Q8NHV5 167 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 TRUB1Q8WWH5 349 aaKnown RBP8.78□□□□□ -1
C11orf54-201ENST00000331239 RORBQ92753 470 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 SECISBP2Q96T21 854 aaKnown RBP8.78□□□□□ -1
C11orf54-201ENST00000331239 BCL7BQ9BQE9 202 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 CNPPD1Q9BV87 410 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 NUDT9Q9BW91 350 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 KRT84Q9NSB2 600 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 SCN3BQ9NY72 215 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 PDP1Q9P0J1 537 aaPredicted RBP8.78□□□□□ -1
C11orf54-201ENST00000331239 IFT52Q9Y366 437 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 PCDHGA10Q9Y5H3 936 aa8.78□□□□□ -1
C11orf54-201ENST00000331239 SPTBN2O15020 2390 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 C5orf58C9J3I9 102 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 J3QRK9 145 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 SERPINB7O75635 380 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 HNRNPCP07910 306 aaKnown RBP eCLIP8.77□□□□□ -1.01
C11orf54-201ENST00000331239 MLLT10P55197 1068 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 PCBP3P57721 371 aaKnown RBP8.77□□□□□ -1.01
C11orf54-201ENST00000331239 RNF4P78317 190 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 RPP38P78345 283 aaKnown RBP8.77□□□□□ -1.01
C11orf54-201ENST00000331239 SLC35A2P78381 396 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 POU6F2P78424 691 aaPredicted RBP8.77□□□□□ -1.01
C11orf54-201ENST00000331239 EMX1Q04741 257 aaPredicted RBP8.77□□□□□ -1.01
C11orf54-201ENST00000331239 CLN3Q13286 438 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 EFR3AQ14156 821 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 LASP1Q14847 261 aaKnown RBP8.77□□□□□ -1.01
C11orf54-201ENST00000331239 EBPQ15125 230 aaKnown RBP8.77□□□□□ -1.01
C11orf54-201ENST00000331239 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.77□□□□□ -1.01
C11orf54-201ENST00000331239 LANCL3Q6ZV70 420 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 PIWIL3Q7Z3Z3 882 aaKnown RBP8.77□□□□□ -1.01
C11orf54-201ENST00000331239 CMIPQ8IY22 773 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 SLC34A3Q8N130 599 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 PARP8Q8N3A8 854 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 HORMAD2Q8N7B1 307 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 ATG16L2Q8NAA4 619 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 KCNE4Q8WWG9 221 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 OR8D2Q9GZM6 311 aa8.77□□□□□ -1.01
C11orf54-201ENST00000331239 WWTR1Q9GZV5 400 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms