RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 RADILQ96JH8 1075 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 JMJD8Q96S16 334 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 ZNF382Q96SR6 550 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 PKP2Q99959 881 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 PARD6BQ9BYG5 372 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 OR10A5Q9H207 317 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 C12orf49Q9H741 205 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 ZBTB26Q9HCK0 441 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 EHD3Q9NZN3 535 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 ZNF337Q9Y3M9 751 aa13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 V9GYY5 206 aaPredicted RBP13.07□□□□□ -0.32
CTHRC1-201ENST00000330295 B4DXG7 233 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 PLPP1O14494 284 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 ULK1O75385 1050 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 PRKRAO75569 313 aaKnown RBP13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 CRCPO75575 148 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 GPR75O95800 540 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 ENO1P06733 434 aaKnown RBP13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 SBK3P0C264 359 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 BMP4P12644 408 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 CPA3P15088 417 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 PCMT1P22061 227 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 GPX3P22352 226 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 TNFRSF17Q02223 184 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 PLCXD2Q0VAA5 305 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 CARTPTQ16568 116 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 C18orf63Q68DL7 685 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 EXOC3L1Q86VI1 746 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 METTL6Q8TCB7 284 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 KISS1RQ969F8 398 aaPredicted RBP13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 USB1Q9BQ65 265 aaKnown RBP13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 BPESC1Q9GZL8 116 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 DDX31Q9H8H2 851 aaKnown RBP13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 CXorf21Q9HAI6 301 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 BRF2Q9HAW0 419 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 ADAM29Q9UKF5 820 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 SLC12A4Q9UP95 1085 aa13.06□□□□□ -0.32
CTHRC1-201ENST00000330295 ARFGEF3Q5TH69 2177 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 LOC390937A0A1W2PQ73 354 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 H3BML4 177 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 PLIN3O60664 434 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 FAM58BPP0C7Q3 252 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 ARAFP10398 606 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 HSD3B1P14060 373 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 TSPAN8P19075 237 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 HSD3B2P26439 372 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 ZFP36P26651 326 aaKnown RBP13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 FABP6P51161 128 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 DSCR4P56555 118 aaPredicted RBP13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 UNC50Q53HI1 259 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 CROCCP2Q86T23 111 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 CDYL2Q8N8U2 506 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 GBP7Q8N8V2 638 aaPredicted RBP13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 ZNF540Q8NDQ6 660 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 OR2W6PQ8NHA6 318 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 TMEM237Q96Q45 408 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 GLRX2Q9NS18 164 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 MED29Q9NX70 200 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 POU2F3Q9UKI9 436 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 FKBP7Q9Y680 259 aa13.05□□□□□ -0.32
CTHRC1-201ENST00000330295 GOLGA8QA0A0J9YX86 632 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 GOLGA8OA6NCC3 632 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 WASHC1A8K0Z3 465 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 GOLGA8NF8WBI6 632 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 OR4F21O95013 312 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 PROCP04070 461 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 CT62P0C5K7 136 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 SLC35E2P0CK97 266 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 NR2F6P10588 404 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 GRK2P25098 689 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 AGTR1P30556 359 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 IL2RGP31785 369 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 DVL1P1P54792 670 aaPredicted RBP13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 DNAJB13P59910 316 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 SLC18A2Q05940 514 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 CCNYL2Q5T2Q4 361 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 LETMD1Q6P1Q0 360 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 Q6ZSR9 355 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 GALNT12Q8IXK2 581 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 C4orf33Q8N1A6 199 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 RNF175Q8N4F7 328 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 MREGQ8N565 214 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 OR4K17Q8NGC6 315 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 HPS1Q92902 700 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 TMCO6Q96DC7 493 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 NPAP1Q9NZP6 1156 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 SENP1Q9P0U3 644 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 VPS29Q9UBQ0 182 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 LGALS13Q9UHV8 139 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 PTGDR2Q9Y5Y4 395 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 PMF1-BGLAPU3KQ54 211 aa13.04□□□□□ -0.32
CTHRC1-201ENST00000330295 A0A0A6YYD5 115 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 MANBAO00462 879 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 ERLIN1O75477 346 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 ESRRBO95718 433 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 HK1P19367 917 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 APEX1P27695 318 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms