RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 FUT1P19526 365 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 MAKP20794 623 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 SLC9A3P48764 834 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 COPZ1P61923 177 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 PLAURQ03405 335 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 KIR2DS5Q14953 304 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 CD200R1LQ6Q8B3 271 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 CPOQ8IVL8 374 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 SYT14Q8NB59 555 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 TMEM239Q8WW34 195 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 TXNDC15Q96J42 360 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 GAS2L1Q99501 681 aaPredicted RBP13.52□□□□□ -0.25
TPM3-206ENST00000330188 MIXL1Q9H2W2 232 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 C20orf141Q9NUB4 165 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 MUTYHQ9UIF7 546 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 TBC1D24Q9ULP9 559 aa13.52□□□□□ -0.25
TPM3-206ENST00000330188 OR5K4A6NMS3 321 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 SGK494L7N484 410 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 SNPHO15079 494 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 SSX4O60224 188 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 BRINP1O60477 761 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 AK1P00568 194 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 FGF9P31371 208 aaPredicted RBP13.51□□□□□ -0.25
TPM3-206ENST00000330188 GABRA3P34903 492 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 RAB38P57729 211 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 POU6F2P78424 691 aaPredicted RBP13.51□□□□□ -0.25
TPM3-206ENST00000330188 DGAT2L6Q6ZPD8 337 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 CXXC5Q7LFL8 322 aaKnown RBP13.51□□□□□ -0.25
TPM3-206ENST00000330188 ZNF438Q7Z4V0 828 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 TAF8Q7Z7C8 310 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 RNF113BQ8IZP6 322 aaKnown RBP13.51□□□□□ -0.25
TPM3-206ENST00000330188 OR8H2Q8N162 312 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 FANK1Q8TC84 345 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 SRRQ9GZT4 340 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 FAM60AQ9NP50 221 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 ABCB9Q9NP78 766 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 ATP13A2Q9NQ11 1180 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 SIDT1Q9NXL6 827 aaKnown RBP13.51□□□□□ -0.25
TPM3-206ENST00000330188 CLCA2Q9UQC9 943 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 OR5K3A6NET4 321 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 FAM183AA6NL82 134 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 SHISA7A6NL88 538 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 FMO6PO60774 539 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 RDH16O75452 317 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 CBX7O95931 251 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 CTSBP07858 339 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 IFI30P13284 250 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 TBXA2RP21731 343 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 ACSM1Q08AH1 577 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 SELENBP1Q13228 472 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 CCINQ13939 588 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 ZAR1Q86SH2 424 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 OOSP2Q86WS3 158 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 KLHL36Q8N4N3 616 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 SIRT6Q8N6T7 355 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 FAM181AQ8N9Y4 354 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 PSD4Q8NDX1 1056 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 OR52N1Q8NH53 320 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 HS6ST2Q96MM7 605 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 SECISBP2Q96T21 854 aaKnown RBP13.51□□□□□ -0.25
TPM3-206ENST00000330188 CCDC3Q9BQI4 270 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 KATNB1Q9BVA0 655 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 JAM3Q9BX67 310 aa13.51□□□□□ -0.25
TPM3-206ENST00000330188 H2AFY2Q9P0M6 372 aaPredicted RBP13.51□□□□□ -0.25
TPM3-206ENST00000330188 SPTY2D1-AS1A0A0U1RR47 76 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 TRDV1A0A1B0GX56 115 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 J3QRE1 110 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 BHLHE40O14503 412 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 NKX2-2O95096 273 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 APOA1P02647 267 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 ST6GAL1P15907 406 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 TPTEP56180 551 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 FZD2Q14332 565 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 CARTPTQ16568 116 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 BAK1Q16611 211 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 DEFB110Q30KQ9 67 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 ZNF791Q3KP31 576 aaPredicted RBP13.5□□□□□ -0.25
TPM3-206ENST00000330188 KIAA0895LQ68EN5 471 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 SPATC1Q76KD6 591 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 ARHGEF39Q8N4T4 335 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 CELF2-AS1Q8N7Q2 184 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 OR52R1Q8NGF1 315 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 SETD6Q8TBK2 473 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 SPRYD4Q8WW59 207 aaPredicted RBP13.5□□□□□ -0.25
TPM3-206ENST00000330188 HOXB13Q92826 284 aaPredicted RBP13.5□□□□□ -0.25
TPM3-206ENST00000330188 TMCO6Q96DC7 493 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 DCLRE1CQ96SD1 692 aaKnown RBP13.5□□□□□ -0.25
TPM3-206ENST00000330188 CD180Q99467 661 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 ENKD1Q9H0I2 346 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 GSTK1Q9Y2Q3 226 aa13.5□□□□□ -0.25
TPM3-206ENST00000330188 SMIM30A4D0T7 59 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 TYRP1P17643 537 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 CCR5P51681 352 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 HHEXQ03014 270 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 FZD5Q13467 585 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 GLYR1Q49A26 553 aaPredicted RBP13.49□□□□□ -0.25
TPM3-206ENST00000330188 NIPAL3Q6P499 406 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 PLBD1Q6P4A8 553 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 GID4Q8IVV7 300 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 ARIH2OSQ8N7S6 290 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms