RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 CDH10Q9Y6N8 788 aa13.08□□□□□ -0.31
ATP2C1-201ENST00000328560 CEP290O15078 2479 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 DAPL1A0PJW8 107 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 GNB5O14775 395 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 PPP2CBP62714 309 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 PPP2CAP67775 309 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 RUNX2Q13950 521 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 TATDN3Q17R31 274 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 PRRT3Q5FWE3 981 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 RNASE12Q5GAN4 147 aaKnown RBP13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 POGLUT1Q8NBL1 392 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 FANK1Q8TC84 345 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 OR2M4Q96R27 311 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 ATF6BQ99941 703 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 HCAR1Q9BXC0 346 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 B3GAT2Q9NPZ5 323 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 LYARQ9NX58 379 aaKnown RBP13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 A0A0B4J293 547 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 PRSS38A1L453 326 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 P2RX6O15547 441 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 HMGN1P05114 100 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 GYPBP06028 91 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 FCARP24071 287 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 DDOSTP39656 456 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 EXOSC7Q15024 291 aaKnown RBP13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 NDUFA5Q16718 116 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 PPP2R2DQ66LE6 453 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 ZNF322Q6U7Q0 402 aaPredicted RBP13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 PRSS41Q7RTY9 318 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 GHDCQ8N2G8 530 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 ACBD7Q8N6N7 88 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 OR1E3Q8WZA6 343 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 RNF31Q96EP0 1072 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 SENP5Q96HI0 755 aaPredicted RBP13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 CD180Q99467 661 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 MCOLN1Q9GZU1 580 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 SLC28A3Q9HAS3 691 aa13.08□□□□□ -0.32
ATP2C1-201ENST00000328560 A0A1W2PPK0 400 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 UNC119BA6NIH7 251 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 PRKAR1AP10644 381 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 CHRNB1P11230 501 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 HOXB2P14652 356 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 HTR1FP30939 366 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 TLX1P31314 330 aaPredicted RBP13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 ZNF425Q6IV72 752 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 KIAA1324Q6UXG2 1013 aaKnown RBP13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 COX18Q8N8Q8 333 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 GAL3ST3Q96A11 431 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 SIPA1Q96FS4 1042 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 SDF2Q99470 211 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 MED18Q9BUE0 208 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 ALG8Q9BVK2 526 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 USP36Q9P275 1121 aaKnown RBP13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 EXTL2Q9UBQ6 330 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 HEBP2Q9Y5Z4 205 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 SIRT4Q9Y6E7 314 aaPredicted RBP13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 LOC105369274A0A096LPK9 316 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 CTSVO60911 334 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 MAKP20794 623 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 NTSR1P30989 418 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 FGF9P31371 208 aaPredicted RBP13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 ACVR1BP36896 505 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 MRPL2Q5T653 305 aaKnown RBP13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 FBXO42Q6P3S6 717 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 MZT2AQ6P582 158 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 RANBP3LQ86VV4 465 aaPredicted RBP13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 OR4N4Q8N0Y3 316 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 OR5T3Q8NGG3 340 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 OR13C2Q8NGS9 318 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 A0A0C4DFX4 3053 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 TRAV27A0A087WT01 109 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 FAM172BPA6NC97 362 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 B3GALT2O43825 422 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 OR5F1O95221 314 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 CLUP10909 449 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 TEAD1P28347 426 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 SHC1P29353 583 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 NOS3P29474 1203 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 TNFRSF17Q02223 184 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 PRAMEF8Q5VWM4 474 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 PRAMEF7Q5VXH5 474 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 MZT2BQ6NZ67 158 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 SYCE2Q6PIF2 218 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 PARM1Q6UWI2 310 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 WDR88Q6ZMY6 472 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 SNX18Q96RF0 628 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 RNF32Q9H0A6 362 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 TMEM168Q9H0V1 697 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 STARD5Q9NSY2 213 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 SIDT1Q9NXL6 827 aaKnown RBP13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 ZNF624Q9P2J8 865 aaPredicted RBP13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 MRPS2Q9Y399 296 aaKnown RBP13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 NOX1Q9Y5S8 564 aa13.07□□□□□ -0.32
ATP2C1-201ENST00000328560 J3QLW9 94 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 LYRM1O43325 122 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 ZGLP1P0C6A0 271 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 ZNF19P17023 458 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 RPS5P46782 204 aaKnown RBP13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 EVX1P49640 407 aa13.06□□□□□ -0.32
ATP2C1-201ENST00000328560 SUZ12Q15022 739 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms