RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 ASB1Q9Y576 335 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 SMIM30A4D0T7 59 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 ARL5CA6NH57 179 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 BCAT2O15382 392 aaPredicted RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 DIRAS3O95661 229 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 ADRA2AP08913 450 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 CNR1P21554 472 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 LPOP22079 712 aaPredicted RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 MAT2AP31153 395 aaKnown RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 VIPR1P32241 457 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 ADH7P40394 386 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 FOXA1P55317 472 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 RAG2P55895 527 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 CTBP2P56545 445 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 SEC61A1P61619 476 aaKnown RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 UFM1P61960 85 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 TIGD5Q53EQ6 642 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 NCMAPQ5T1S8 102 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 PRAMEF18Q5VWM3 479 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 Q6ZPB1 254 aaPredicted RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 OR4A15Q8NGL6 344 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 SOCS4Q8WXH5 440 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 HSD17B8Q92506 261 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 TM9SF4Q92544 642 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 RAB24Q969Q5 203 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 AMDHD1Q96NU7 426 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 SEPT5Q99719 369 aaPredicted RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 MED10Q9BTT4 135 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 ZDHHC5Q9C0B5 715 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 PRO1933Q9H354 126 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF629Q9UEG4 869 aaPredicted RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 KCND3Q9UK17 655 aa6.23□□□□□ -1.41
ZNF540-201ENST00000316433 PIN4Q9Y237 131 aaKnown RBP6.23□□□□□ -1.41
ZNF540-201ENST00000316433 ABHD14A-ACY1A0A1B0GW23 586 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 CLDN5O00501 218 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 CLDN11O75508 207 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 IFI6P09912 130 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF286BP0CG31 522 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 IFNGR1P15260 489 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ABOP16442 354 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 NFYBP25208 207 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 S100A2P29034 98 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ERVPABLB-1P60509 514 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 SNRPGP62308 76 aaKnown RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 MRPS11P82912 194 aaKnown RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 SREBF2Q12772 1141 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 GAGE1Q13065 139 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 GAB1Q13480 694 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ARHGEF7Q14155 803 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 SURF2Q15527 256 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ZSWIM7Q19AV6 140 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 DUOXA1Q1HG43 343 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 NDUFAF6Q330K2 333 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 RNASE10Q5GAN6 216 aaKnown RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 DNLZQ5SXM8 178 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 FAM69AQ5T7M9 428 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 COL13A1Q5TAT6 717 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 OR52W1Q6IF63 320 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF613Q6PF04 617 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 NCEH1Q6PIU2 408 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 GOLGA7Q7Z5G4 137 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 GPSM1Q86YR5 675 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 OR9Q1Q8NGQ5 310 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 OR9A1PQ8NGU1 263 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 WNT2BQ93097 391 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 C3orf49Q96BT1 292 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 FOXRED1Q96CU9 486 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 PHF21BQ96EK2 531 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 OR51V1Q9H2C8 321 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 MS4A12Q9NXJ0 267 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 RASL12Q9NYN1 266 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 SLC25A37Q9NYZ2 338 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 STOX2Q9P2F5 926 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 DNAJB11Q9UBS4 358 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 CFAP20Q9Y6A4 193 aaKnown RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 PRRT4C9JH25 899 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 MCIDASD6RGH6 385 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 MKRN2OSH3BPM6 223 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 INSIG1O15503 277 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ARPC5O15511 151 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 HSPA12AO43301 675 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 LANCL1O43813 399 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 TPST2O60704 377 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 GALR3O60755 368 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 RAMP2O60895 175 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 DUSP11O75319 330 aaKnown RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 SPDEFO95238 335 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 F12P00748 615 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 LAG3P18627 525 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 HNF1AP20823 631 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 GJA5P36382 358 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ADCYAP1R1P41586 468 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 CHRNA4P43681 627 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 AVPR1BP47901 424 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 LSM6P62312 80 aaKnown RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 ZNF177Q13360 481 aaPredicted RBP6.22□□□□□ -1.41
ZNF540-201ENST00000316433 TDGQ13569 410 aa6.22□□□□□ -1.41
ZNF540-201ENST00000316433 GAMTQ14353 236 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms