RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 C1QCP02747 245 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 NPIPA8P0DM63 369 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 SLC18A1P54219 525 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 SORDQ00796 357 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 STX3Q13277 289 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 PLPPR5Q32ZL2 321 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 LSM12Q3MHD2 195 aaKnown RBP17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 KLHL26Q53HC5 615 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 DCST2Q5T1A1 773 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 OGFOD2Q6N063 350 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 CBLN3Q6UW01 205 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 GRAMD2AQ8IUY3 354 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 GTPBP8Q8N3Z3 284 aaPredicted RBP17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 OR5D16Q8NGK9 328 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 ACTRT2Q8TDY3 377 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 STARD4Q96DR4 205 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 TEX37Q96LM6 180 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 OR7D2Q96RA2 312 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 PRPF18Q99633 342 aaKnown RBP17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 MED17Q9NVC6 651 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 VDAC3Q9Y277 283 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 PRR14LQ5THK1 2151 aa17.84■□□□□ 0.45
PDZRN3-202ENST00000308537 A8MXE2 369 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 EEF1E1-BLOC1S5C9J1V9 151 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 RNASET2O00584 256 aaKnown RBP17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 EEF1E1O43324 174 aaKnown RBP17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 LINGO3P0C6S8 592 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 NID1P14543 1247 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 ZNF17P17021 662 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 PEX19P40855 299 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 KIR2DL2P43627 348 aaPredicted RBP17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 RPS26P62854 115 aaKnown RBP17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 OCRLQ01968 901 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 ZNF117Q03924 483 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 VWA1Q6PCB0 445 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 FNDC9Q8TBE3 224 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 TESCQ96BS2 214 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 MOAP1Q96BY2 351 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 RNF122Q9H9V4 155 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 RASSF1Q9NS23 344 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 GALNT8Q9NY28 637 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 KCNE5Q9UJ90 142 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 ZNF175Q9Y473 711 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 AP4B1Q9Y6B7 739 aa17.83■□□□□ 0.44
PDZRN3-202ENST00000308537 A0A087WZY1 265 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 SLC22A20A6NK97 555 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 SEC14L5O43304 696 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 EFNA2O43921 213 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 CGAP01215 116 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 CRHP06850 196 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 CASP8Q14790 479 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 DAZAP2Q15038 168 aaPredicted RBP17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 PGS1Q32NB8 556 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 TMEM200AQ86VY9 491 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 MISPQ8IVT2 679 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 MEIOBQ8N635 442 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 ANKRD42Q8N9B4 389 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 CHDHQ8NE62 594 aaPredicted RBP17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 LINC01560Q8TB33 94 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 ADAMTS15Q8TE58 950 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 FAM222BQ8WU58 562 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 SH3YL1Q96HL8 342 aaPredicted RBP17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 SDF2Q99470 211 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 GPATCH1Q9BRR8 931 aaKnown RBP17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 PINK1Q9BXM7 581 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 TMBIM4Q9HC24 238 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 ICAM5Q9UMF0 924 aa17.82■□□□□ 0.44
PDZRN3-202ENST00000308537 FREM1Q5H8C1 2179 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 MAP1AP78559 2803 aaPredicted RBP17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 CENPVL1A0A0U1RR11 272 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 A6NNC1 897 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 AQP8O94778 261 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 LBPP18428 481 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 IL11P20809 199 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 IL12AP29459 219 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 RNF144AP50876 292 aaPredicted RBP17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 SPANXN4Q5MJ08 99 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 AP1ARQ63HQ0 302 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 OLIG3Q7RTU3 272 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 C6orf120Q7Z4R8 191 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 BTLAQ7Z6A9 289 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 LUZP2Q86TE4 346 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 ANKRD46Q86W74 232 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 MIPOL1Q8TD10 442 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 RNF145Q96MT1 663 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 RBM24Q9BX46 236 aaKnown RBP17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 ACBD3Q9H3P7 528 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 PIGMQ9H3S5 423 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 LIME1Q9H400 295 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 PACSIN3Q9UKS6 424 aa17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 FAF1Q9UNN5 650 aaPredicted RBP17.81■□□□□ 0.44
PDZRN3-202ENST00000308537 VPS13CQ709C8 3753 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 SCDO00767 359 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 ADAMDEC1O15204 470 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 SHC1P29353 583 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 DNAJA1P31689 397 aaKnown RBP17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 SLC6A8P48029 635 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 PCYT1AP49585 367 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 ATP12AP54707 1039 aa17.8■□□□□ 0.44
PDZRN3-202ENST00000308537 MAGOHP61326 146 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms