RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 KLF4O43474 513 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 MPZL2O60487 215 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 ADAM11O75078 769 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 SCRG1O75711 98 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 INMTO95050 263 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 ACAA2P42765 397 aaKnown RBP20.57■□□□□ 0.88
SMAD1-201ENST00000302085 GIPRP48546 466 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 DUSP3P51452 185 aaPredicted RBP20.57■□□□□ 0.88
SMAD1-201ENST00000302085 FGFBP1Q14512 234 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 GINS1Q14691 196 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 PHF19Q5T6S3 580 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 B3GNT6Q6ZMB0 384 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 SHISA6Q6ZSJ9 500 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 PRSS48Q7RTY5 328 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 ADIPOR1Q96A54 375 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 IL4I1Q96RQ9 567 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 ZNF559Q9BR84 538 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 PLA2G12AQ9BZM1 189 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 NXF5Q9H1B4 397 aaKnown RBP20.57■□□□□ 0.88
SMAD1-201ENST00000302085 DSN1Q9H410 356 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 OCIAD1Q9NX40 245 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 NCOR1O75376 2440 aa20.57■□□□□ 0.88
SMAD1-201ENST00000302085 MASP1P48740 699 aa20.56■□□□□ 0.88
SMAD1-201ENST00000302085 PSMD4P55036 377 aaKnown RBP20.56■□□□□ 0.88
SMAD1-201ENST00000302085 SNRPGP62308 76 aaKnown RBP20.56■□□□□ 0.88
SMAD1-201ENST00000302085 CDK5Q00535 292 aa20.56■□□□□ 0.88
SMAD1-201ENST00000302085 TUBA3CQ13748 450 aa20.56■□□□□ 0.88
SMAD1-201ENST00000302085 NKAIN1Q4KMZ8 207 aa20.56■□□□□ 0.88
SMAD1-201ENST00000302085 TCEAL6Q6IPX3 200 aa20.56■□□□□ 0.88
SMAD1-201ENST00000302085 STT3BQ8TCJ2 826 aa20.56■□□□□ 0.88
SMAD1-201ENST00000302085 TCEAL3Q969E4 200 aa20.56■□□□□ 0.88
SMAD1-201ENST00000302085 ISOC1Q96CN7 298 aa20.56■□□□□ 0.88
SMAD1-201ENST00000302085 COPS4Q9BT78 406 aa20.56■□□□□ 0.88
SMAD1-201ENST00000302085 EGLN3Q9H6Z9 239 aa20.56■□□□□ 0.88
SMAD1-201ENST00000302085 IGLV3-12A0A075B6K2 115 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 CLCA1A8K7I4 914 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 NTN3O00634 580 aaPredicted RBP20.55■□□□□ 0.88
SMAD1-201ENST00000302085 DCKP27707 260 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 ANGPT1Q15389 498 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 CLPPQ16740 277 aaPredicted RBP20.55■□□□□ 0.88
SMAD1-201ENST00000302085 ACSM5Q6NUN0 579 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 RASSF6Q6ZTQ3 369 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 LANCL3Q6ZV70 420 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 EFHD2Q96C19 240 aaPredicted RBP20.55■□□□□ 0.88
SMAD1-201ENST00000302085 NAA50Q9GZZ1 169 aaKnown RBP20.55■□□□□ 0.88
SMAD1-201ENST00000302085 ARRDC1-AS1Q9H2J1 176 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 APMAPQ9HDC9 416 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 CLN6Q9NWW5 311 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 FLRT3Q9NZU0 649 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 ASCC3Q8N3C0 2202 aaKnown RBP20.55■□□□□ 0.88
SMAD1-201ENST00000302085 PTNP21246 168 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 FPR3P25089 353 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 CASP12Q6UXS9 341 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 POGLUT1Q8NBL1 392 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 OR14A16Q8NHC5 309 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 ATOH1Q92858 354 aaPredicted RBP20.55■□□□□ 0.88
SMAD1-201ENST00000302085 DAZLQ92904 295 aaKnown RBP20.55■□□□□ 0.88
SMAD1-201ENST00000302085 PHOX2BQ99453 314 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 TMEM27Q9HBJ8 222 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 GPR83Q9NYM4 423 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 PTTG2Q9NZH5 202 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 ZNF223Q9UK11 482 aaPredicted RBP20.55■□□□□ 0.88
SMAD1-201ENST00000302085 CFL2Q9Y281 166 aa20.55■□□□□ 0.88
SMAD1-201ENST00000302085 BDP1A6H8Y1 2624 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 ZNF99A8MXY4 864 aaPredicted RBP20.54■□□□□ 0.88
SMAD1-201ENST00000302085 ZGLP1P0C6A0 271 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 AVPR2P30518 371 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 MPLP40238 635 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 STAT5AP42229 794 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 GPR4P46093 362 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 GP2P55259 537 aaKnown RBP20.54■□□□□ 0.88
SMAD1-201ENST00000302085 MVKQ03426 396 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 KLHL26Q53HC5 615 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 FAAH2Q6GMR7 532 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 ZNF613Q6PF04 617 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 OR8D4Q8NGM9 314 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 TRUB1Q8WWH5 349 aaKnown RBP20.54■□□□□ 0.88
SMAD1-201ENST00000302085 LCORQ96JN0 433 aaPredicted RBP20.54■□□□□ 0.88
SMAD1-201ENST00000302085 LIN28AQ9H9Z2 209 aaKnown RBP20.54■□□□□ 0.88
SMAD1-201ENST00000302085 C14orf105Q9NVL8 296 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 TVP23BQ9NYZ1 205 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 SH3D21A4FU49 640 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 SERINC4A6NH21 518 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 ZNF701M0R085 212 aaPredicted RBP20.54■□□□□ 0.88
SMAD1-201ENST00000302085 POLR1CO15160 346 aaPredicted RBP20.54■□□□□ 0.88
SMAD1-201ENST00000302085 ENTPD6O75354 484 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 IL33O95760 270 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 PCSK6P29122 969 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 ZSWIM7Q19AV6 140 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 ZNF385CQ66K41 422 aaPredicted RBP20.54■□□□□ 0.88
SMAD1-201ENST00000302085 CMIPQ8IY22 773 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 MYDGFQ969H8 173 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 C12orf43Q96C57 262 aaKnown RBP20.54■□□□□ 0.88
SMAD1-201ENST00000302085 SLC25A19Q9HC21 320 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 SELENONQ9NZV5 590 aa20.54■□□□□ 0.88
SMAD1-201ENST00000302085 FRG2CA6NGY1 282 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 D6RAR5 112 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 FADS2O95864 444 aaKnown RBP20.53■□□□□ 0.88
SMAD1-201ENST00000302085 ONECUT2O95948 504 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 CDK1P06493 297 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms