RNA–Protein interactions for RNA: ENST00000292535.11

CUX1-201, Transcript of cut like homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CUX1, Length 13,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-201ENST00000292535 SLC2A13Q96QE2 648 aa8.82□□□□□ -1
CUX1-201ENST00000292535 SAMD10Q9BYL1 202 aa8.82□□□□□ -1
CUX1-201ENST00000292535 ATXN7L1Q9ULK2 861 aaPredicted RBP8.82□□□□□ -1
CUX1-201ENST00000292535 PRELID3BQ9Y3B1 194 aa8.82□□□□□ -1
CUX1-201ENST00000292535 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.82□□□□□ -1
CUX1-201ENST00000292535 AIPO00170 330 aa8.82□□□□□ -1
CUX1-201ENST00000292535 RNASET2O00584 256 aaKnown RBP8.82□□□□□ -1
CUX1-201ENST00000292535 PTTG1O95997 202 aa8.82□□□□□ -1
CUX1-201ENST00000292535 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.82□□□□□ -11e-9■□□□□ 9.1
CUX1-201ENST00000292535 BIRC8Q96P09 236 aa8.82□□□□□ -1
CUX1-201ENST00000292535 F2RL3Q96RI0 385 aa8.82□□□□□ -1
CUX1-201ENST00000292535 ASB4Q9Y574 426 aa8.82□□□□□ -1
CUX1-201ENST00000292535 C20orf202A1L168 122 aa8.82□□□□□ -1
CUX1-201ENST00000292535 OR5K3A6NET4 321 aa8.82□□□□□ -1
CUX1-201ENST00000292535 PAHP00439 452 aa8.82□□□□□ -1
CUX1-201ENST00000292535 FAM182AQ5T1J6 154 aa8.82□□□□□ -1
CUX1-201ENST00000292535 TSSK2Q96PF2 358 aa8.82□□□□□ -1
CUX1-201ENST00000292535 PCDHA9Q9Y5H5 950 aa8.82□□□□□ -1
CUX1-201ENST00000292535 UBR2Q8IWV8 1755 aa8.82□□□□□ -1
CUX1-201ENST00000292535 RDH16O75452 317 aa8.82□□□□□ -1
CUX1-201ENST00000292535 AKAIN1P0CW23 69 aa8.82□□□□□ -1
CUX1-201ENST00000292535 TAS2R19P59542 299 aa8.82□□□□□ -1
CUX1-201ENST00000292535 SRPXP78539 464 aa8.82□□□□□ -1
CUX1-201ENST00000292535 EXOSC6Q5RKV6 272 aaKnown RBP8.82□□□□□ -1
CUX1-201ENST00000292535 FAM46AQ96IP4 442 aaKnown RBP8.82□□□□□ -1
CUX1-201ENST00000292535 TCEAL7Q9BRU2 100 aa8.82□□□□□ -1
CUX1-201ENST00000292535 ZNF840PA6NDX5 716 aa8.81□□□□□ -1
CUX1-201ENST00000292535 TSTD3H0UI37 97 aa8.81□□□□□ -1
CUX1-201ENST00000292535 K7EQM0 130 aa8.81□□□□□ -1
CUX1-201ENST00000292535 ADAP00813 363 aa8.81□□□□□ -1
CUX1-201ENST00000292535 SERPINA7P05543 415 aa8.81□□□□□ -1
CUX1-201ENST00000292535 HACD4Q5VWC8 232 aa8.81□□□□□ -1
CUX1-201ENST00000292535 STEAP4Q687X5 459 aa8.81□□□□□ -1
CUX1-201ENST00000292535 BIN3Q9NQY0 253 aa8.81□□□□□ -1
CUX1-201ENST00000292535 AFF3P51826 1226 aaKnown RBP8.81□□□□□ -1
CUX1-201ENST00000292535 UBE2G2P60604 165 aa8.81□□□□□ -1
CUX1-201ENST00000292535 TLDC1Q6P9B6 456 aa8.81□□□□□ -1
CUX1-201ENST00000292535 CFAP77Q6ZQR2 320 aa8.81□□□□□ -1
CUX1-201ENST00000292535 OR4D6Q8NGJ1 314 aa8.81□□□□□ -1
CUX1-201ENST00000292535 ZNF334Q9HCZ1 680 aaPredicted RBP8.81□□□□□ -1
CUX1-201ENST00000292535 CAMK2AQ9UQM7 478 aa8.81□□□□□ -1
CUX1-201ENST00000292535 IER3IP1Q9Y5U9 82 aa8.81□□□□□ -1
CUX1-201ENST00000292535 MSTNO14793 375 aa8.81□□□□□ -1
CUX1-201ENST00000292535 BEST1O76090 585 aa8.81□□□□□ -1
CUX1-201ENST00000292535 KIR2DL3P43628 341 aa8.81□□□□□ -1
CUX1-201ENST00000292535 INTS14Q96SY0 518 aa8.81□□□□□ -1
CUX1-201ENST00000292535 NKX3-1Q99801 234 aaPredicted RBP8.81□□□□□ -1
CUX1-201ENST00000292535 NICN1Q9BSH3 213 aa8.81□□□□□ -1
CUX1-201ENST00000292535 KLHL42Q9P2K6 505 aa8.81□□□□□ -1
CUX1-201ENST00000292535 PLBD1Q6P4A8 553 aa8.81□□□□□ -1
CUX1-201ENST00000292535 PINK1Q9BXM7 581 aa8.81□□□□□ -1
CUX1-201ENST00000292535 GKP32189 559 aa8.81□□□□□ -1
CUX1-201ENST00000292535 SPINT3P49223 89 aa8.81□□□□□ -1
CUX1-201ENST00000292535 F2RL1P55085 397 aa8.81□□□□□ -1
CUX1-201ENST00000292535 TMEM236Q5W0B7 351 aa8.81□□□□□ -1
CUX1-201ENST00000292535 WBP2NLQ6ICG8 309 aa8.81□□□□□ -1
CUX1-201ENST00000292535 ZNF419Q96HQ0 510 aaPredicted RBP8.81□□□□□ -1
CUX1-201ENST00000292535 SMIM30A4D0T7 59 aa8.81□□□□□ -1
CUX1-201ENST00000292535 ANHXE9PGG2 379 aa8.81□□□□□ -1
CUX1-201ENST00000292535 CPOXP36551 454 aa8.81□□□□□ -1
CUX1-201ENST00000292535 OLIG2Q13516 323 aa8.81□□□□□ -1
CUX1-201ENST00000292535 PDLIM3Q53GG5 364 aaPredicted RBP8.81□□□□□ -1
CUX1-201ENST00000292535 C3orf38Q5JPI3 329 aa8.81□□□□□ -1
CUX1-201ENST00000292535 ADAMTS16Q8TE57 1224 aa8.81□□□□□ -1
CUX1-201ENST00000292535 SLC17A9Q9BYT1 436 aa8.81□□□□□ -1
CUX1-201ENST00000292535 SLC22A7Q9Y694 548 aa8.81□□□□□ -1
CUX1-201ENST00000292535 SULT2B1O00204 365 aa8.81□□□□□ -1
CUX1-201ENST00000292535 PEX10O60683 326 aa8.81□□□□□ -1
CUX1-201ENST00000292535 IL1RNP18510 177 aa8.81□□□□□ -1
CUX1-201ENST00000292535 VEGFCP49767 419 aa8.81□□□□□ -1
CUX1-201ENST00000292535 RRADP55042 308 aa8.81□□□□□ -1
CUX1-201ENST00000292535 SFT2D3Q587I9 215 aa8.81□□□□□ -1
CUX1-201ENST00000292535 NDNFQ8TB73 568 aa8.81□□□□□ -1
CUX1-201ENST00000292535 KCNIP2Q9NS61 270 aa8.81□□□□□ -1
CUX1-201ENST00000292535 ZNF337Q9Y3M9 751 aa8.81□□□□□ -1
CUX1-201ENST00000292535 PAN3Q58A45 887 aaKnown RBP8.81□□□□□ -1
CUX1-201ENST00000292535 SBSNQ6UWP8 590 aa8.81□□□□□ -1
CUX1-201ENST00000292535 NRMQ8IXM6 262 aa8.81□□□□□ -1
CUX1-201ENST00000292535 CNEP1R1Q8N9A8 125 aa8.81□□□□□ -1
CUX1-201ENST00000292535 FAM174AQ8TBP5 190 aa8.81□□□□□ -1
CUX1-201ENST00000292535 HAS2Q92819 552 aa8.81□□□□□ -1
CUX1-201ENST00000292535 SENP5Q96HI0 755 aaPredicted RBP8.81□□□□□ -1
CUX1-201ENST00000292535 CRB3Q9BUF7 120 aa8.81□□□□□ -1
CUX1-201ENST00000292535 TMEM59LQ9UK28 342 aa8.81□□□□□ -1
CUX1-201ENST00000292535 SLC7A7Q9UM01 511 aa8.81□□□□□ -1
CUX1-201ENST00000292535 FABP1P07148 127 aa8.81□□□□□ -1
CUX1-201ENST00000292535 DCNP07585 359 aaKnown RBP8.81□□□□□ -1
CUX1-201ENST00000292535 KDELR2P33947 212 aa8.81□□□□□ -1
CUX1-201ENST00000292535 AQP2P41181 271 aa8.81□□□□□ -1
CUX1-201ENST00000292535 DCST2Q5T1A1 773 aa8.81□□□□□ -1
CUX1-201ENST00000292535 TRIM73Q86UV7 250 aa8.81□□□□□ -1
CUX1-201ENST00000292535 VWA5B2Q8N398 1253 aa8.81□□□□□ -1
CUX1-201ENST00000292535 ARNT2Q9HBZ2 717 aa8.81□□□□□ -1
CUX1-201ENST00000292535 DECR2Q9NUI1 292 aa8.81□□□□□ -1
CUX1-201ENST00000292535 PROS1P07225 676 aa8.81□□□□□ -1
CUX1-201ENST00000292535 COMMD6Q7Z4G1 85 aa8.81□□□□□ -1
CUX1-201ENST00000292535 OR4N2Q8NGD1 307 aa8.81□□□□□ -1
CUX1-201ENST00000292535 ZNF417Q8TAU3 575 aa8.81□□□□□ -1
CUX1-201ENST00000292535 OR51J1Q9H342 316 aa8.81□□□□□ -1
CUX1-201ENST00000292535 MTHFD2LQ9H903 347 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms