RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 RAB40BQ12829 278 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 CDK10Q15131 360 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 TAF8Q7Z7C8 310 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 TTLQ8NG68 377 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 OR5K2Q8NHB8 316 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 CREB3L4Q8TEY5 395 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 SRA1Q9HD15 236 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 HINT3Q9NQE9 182 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 STOML2Q9UJZ1 356 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 HOXC11O43248 304 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 OC90Q02509 493 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 FCN2Q15485 313 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 LAS2Q8IYD9 372 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 LRRC25Q8N386 305 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 ZNF563Q8TA94 476 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 METTL2AQ96IZ6 378 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 HSPA12BQ96MM6 686 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 CRISPLD2Q9H0B8 497 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 ZNF69Q9UC07 566 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 DIMT1Q9UNQ2 313 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 A0A0G2JPF8 293 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 TEX13CA0A0J9YWL9 993 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 URADA6NGE7 173 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 AGAP14A8MT82 685 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 FAM25EA8MYX2 175 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 HNRNPCL3B7ZW38 293 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 KHNYNO15037 678 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 KLF8O95600 359 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 HNRNPCL4P0DMR1 293 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 CLUP10909 449 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 DRD2P14416 443 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 CCR6P51684 374 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 IRF4Q15306 451 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 PGGHGQ32M88 737 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 DEFB119Q8N690 84 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 CHFRQ96EP1 664 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 CNRIP1Q96F85 164 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 CCDC120Q96HB5 630 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 SLITRK2Q9H156 845 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 FN3KQ9H479 309 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 MYEF2Q9P2K5 600 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 MRPS17Q9Y2R5 130 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 TSC2P49815 1807 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 MEIS3P1A6NDR6 274 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 GREM1O60565 184 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 ATF4P18848 351 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 GJD3Q8N144 294 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 OR5W2Q8NH69 310 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 PFN4Q8NHR9 129 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 CHST8Q9H2A9 424 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 A4GNTQ9UNA3 340 aa15.13■□□□□ 0.01
PDZRN3-201ENST00000263666 TRBV2A0A0J9YWF9 115 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 FABP7O15540 132 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 GATBO75879 557 aaKnown RBP15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 IGHA2P01877 340 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 ADRA2AP08913 450 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 SNTB2Q13425 540 aaKnown RBP15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 PUS10Q3MIT2 529 aaKnown RBP15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 FBXL6Q8N531 539 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 TMEM99Q8N816 258 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 AHCYL2Q96HN2 611 aaKnown RBP15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 ACSL5Q9ULC5 683 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 FMO6PO60774 539 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 RCBTB2O95199 551 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 ATP5A1P25705 553 aaKnown RBP15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 ERP29P30040 261 aaKnown RBP15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 HSD17B2P37059 387 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 ERV3-1Q14264 604 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 FAM220AQ7Z4H9 259 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 OR8S1Q8NH09 359 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 ACOT11Q8WXI4 607 aaPredicted RBP15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 SLC25A36Q96CQ1 311 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 GDE1Q9NZC3 331 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 NFKBIL1Q9UBC1 381 aaPredicted RBP15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 STON1Q9Y6Q2 735 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 OR2W5A6NFC9 320 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 PCP4L1A6NKN8 68 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 FLRT2O43155 660 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 ILF3Q12906 894 aaKnown RBP eCLIP15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 ASPGQ86U10 573 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 TSTD1Q8NFU3 115 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 OR4M1Q8NGD0 313 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 SETD6Q8TBK2 473 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 SPACA7Q96KW9 195 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 PBX4Q9BYU1 374 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 NDUFB11Q9NX14 153 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 CHST2Q9Y4C5 530 aa15.12■□□□□ 0.01
PDZRN3-201ENST00000263666 NUPL2O15504 423 aaKnown RBP15.11■□□□□ 0.01
PDZRN3-201ENST00000263666 RGS9O75916 674 aaPredicted RBP15.11■□□□□ 0.01
PDZRN3-201ENST00000263666 ARSBP15848 533 aa15.11■□□□□ 0.01
PDZRN3-201ENST00000263666 ELK1P19419 428 aa15.11■□□□□ 0.01
PDZRN3-201ENST00000263666 DNASE1P24855 282 aa15.11■□□□□ 0.01
PDZRN3-201ENST00000263666 GBX2P52951 348 aaPredicted RBP15.11■□□□□ 0.01
PDZRN3-201ENST00000263666 FAM109BQ6ICB4 259 aaPredicted RBP15.11■□□□□ 0.01
PDZRN3-201ENST00000263666 TANGO2Q6ICL3 276 aa15.11■□□□□ 0.01
PDZRN3-201ENST00000263666 ZNF793Q6ZN11 406 aa15.11■□□□□ 0.01
PDZRN3-201ENST00000263666 PLPP6Q8IY26 295 aa15.11■□□□□ 0.01
PDZRN3-201ENST00000263666 LINC00471Q8N535 108 aa15.11■□□□□ 0.01
PDZRN3-201ENST00000263666 OR2T35Q8NGX2 323 aa15.11■□□□□ 0.01
PDZRN3-201ENST00000263666 TNFAIP8L1Q8WVP5 186 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms