RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ZNF639Q9UID6 485 aa12.22□□□□□ -0.45
SGCA-201ENST00000262018 ANGPT4Q9Y264 503 aa12.22□□□□□ -0.45
SGCA-201ENST00000262018 SAC3D1A6NKF1 404 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 FAM171A2A8MVW0 826 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 TMEM229AB2RXF0 380 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 UPK1AO00322 258 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 HMGN4O00479 90 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 ACOX3O15254 700 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 CHST10O43529 356 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 ZNF682O95780 498 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 HEXBP07686 556 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 FHP07954 510 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 IFI6P09912 130 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 CPMP14384 443 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 MATN1P21941 496 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 PTGS2P35354 604 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 ANXA11P50995 505 aaKnown RBP12.21□□□□□ -0.45
SGCA-201ENST00000262018 RPS26P62854 115 aaKnown RBP12.21□□□□□ -0.45
SGCA-201ENST00000262018 TP53BP2Q13625 1128 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 OR1C1Q15619 314 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 CYBRD1Q53TN4 286 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 SPINK14Q6IE38 97 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 TNFAIP8L2Q6P589 184 aaPredicted RBP12.21□□□□□ -0.45
SGCA-201ENST00000262018 GALNTL5Q7Z4T8 443 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 GALNT10Q86SR1 603 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 PATL1Q86TB9 770 aaKnown RBP12.21□□□□□ -0.45
SGCA-201ENST00000262018 ZC3H7AQ8IWR0 971 aaKnown RBP12.21□□□□□ -0.45
SGCA-201ENST00000262018 GALNT4Q8N4A0 578 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 TMEM178AQ8NBL3 297 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 TMEM52Q8NDY8 209 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 OR9A2Q8NGT5 310 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 OR51Q1Q8NH59 317 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 FAM57AQ8TBR7 257 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 TANKQ92844 425 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 ELP4Q96EB1 424 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 SCMH1Q96GD3 660 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 HSH2DQ96JZ2 352 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 ZNF354BQ96LW1 612 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 ZNF597Q96LX8 424 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 SLC29A1Q99808 456 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 UTP23Q9BRU9 249 aaKnown RBP12.21□□□□□ -0.45
SGCA-201ENST00000262018 OSBPL11Q9BXB4 747 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 TGIF2Q9GZN2 237 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 FAM192AQ9GZU8 254 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 C3orf14Q9HBI5 128 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 IL1RAPQ9NPH3 570 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 HCN3Q9P1Z3 774 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 HRH3Q9Y5N1 445 aa12.21□□□□□ -0.45
SGCA-201ENST00000262018 PLOD2O00469 737 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 SOCS2O14508 198 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 GPR75O95800 540 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 CST1P01037 141 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 TFPTP0C1Z6 253 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 PORP16435 677 aaPredicted RBP12.2□□□□□ -0.46
SGCA-201ENST00000262018 ZNF24P17028 368 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 PTGER1P34995 402 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 CD96P40200 585 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 XCR1P46094 333 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 KHKP50053 298 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 SELENOWP63302 87 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 PRR5P85299 388 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 MAT1AQ00266 395 aaKnown RBP12.2□□□□□ -0.46
SGCA-201ENST00000262018 MAPK11Q15759 364 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 SYT16Q17RD7 645 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 DEFB113Q30KQ7 82 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 ACER2Q5QJU3 275 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 REEP3Q6NUK4 255 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 TMEM107Q6UX40 140 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 PIWIL3Q7Z3Z3 882 aaKnown RBP12.2□□□□□ -0.46
SGCA-201ENST00000262018 CDC20BQ86Y33 519 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 ZDHHC21Q8IVQ6 265 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 NUP43Q8NFH3 380 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 TAMM41Q96BW9 452 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 IMMP1LQ96LU5 166 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 OR1F2PQ96R84 312 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 DOHHQ9BU89 302 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 OR51I1Q9H343 314 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 RASSF1Q9NS23 344 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 NDUFA13Q9P0J0 144 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 OAZ3Q9UMX2 235 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 LOC102723996A0A087X1L8 192 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 A0A1B0GTH9 108 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 C7orf72A4D263 438 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 M0QX08 132 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 FGF17O60258 216 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 SLITRK5O94991 958 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 IFNA14P01570 189 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 RNH1P13489 461 aaKnown RBP12.2□□□□□ -0.46
SGCA-201ENST00000262018 AQP1P29972 269 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 MC3RP41968 323 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 DLX5P56178 289 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 KCNJ10P78508 379 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 LTB4RQ15722 352 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 RNFT1Q5M7Z0 435 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 PAMR1Q6UXH9 720 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 VTCN1Q7Z7D3 282 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 OR4N5Q8IXE1 308 aa12.2□□□□□ -0.46
SGCA-201ENST00000262018 ST13P4Q8IZP2 240 aaPredicted RBP12.2□□□□□ -0.46
SGCA-201ENST00000262018 RPRMLQ8N4K4 120 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms