RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 SGPP1Q9BX95 441 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 RDH8Q9NYR8 311 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 KLHL21Q9UJP4 597 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 CACNG2Q9Y698 323 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 ABHD14A-ACY1A0A1B0GW23 586 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 SAGP10523 405 aaPredicted RBP12.11□□□□□ -0.47
SNX1-201ENST00000261889 APEHP13798 732 aaKnown RBP12.11□□□□□ -0.47
SNX1-201ENST00000261889 RAB40BQ12829 278 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 SF3A2Q15428 464 aaKnown RBP12.11□□□□□ -0.47
SNX1-201ENST00000261889 CDONQ4KMG0 1287 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 STPG1Q5TH74 334 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 FAM111BQ6SJ93 734 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 WDR88Q6ZMY6 472 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 HTR3DQ70Z44 454 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 CXXC5Q7LFL8 322 aaKnown RBP12.11□□□□□ -0.47
SNX1-201ENST00000261889 RD3Q7Z3Z2 195 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 BPHLQ86WA6 291 aaPredicted RBP12.11□□□□□ -0.47
SNX1-201ENST00000261889 PLCZ1Q86YW0 608 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 TOMM5Q8N4H5 51 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 ZBTB44Q8NCP5 570 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 OR52B4Q8NGK2 314 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 CDS1Q92903 461 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 ZMYND19Q96E35 227 aaPredicted RBP12.11□□□□□ -0.47
SNX1-201ENST00000261889 FERD3LQ96RJ6 166 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 MS4A8Q9BY19 250 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 ZCCHC2Q9C0B9 1178 aaKnown RBP12.11□□□□□ -0.47
SNX1-201ENST00000261889 OR51J1Q9H342 316 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 A4GALTQ9NPC4 353 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 C12orf4Q9NQ89 552 aa12.11□□□□□ -0.47
SNX1-201ENST00000261889 A0A1W2PRQ8 180 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 OTOL1A6NHN0 477 aaPredicted RBP12.1□□□□□ -0.47
SNX1-201ENST00000261889 HNRNPCL2B2RXH8 293 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 SPINT1O43278 529 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 RNF13O43567 381 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 RFPL3O75679 317 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 OR5F1O95221 314 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 ALDOBP05062 364 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 UBL4AP11441 157 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 DNASE1P24855 282 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 STOMP27105 288 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 PTGS2P35354 604 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 MMP12P39900 470 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 ADH7P40394 386 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 VEGFCP49767 419 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 KIAA1024LP59773 190 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 PLPP4Q5VZY2 271 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 NHLRC1Q6VVB1 395 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 LRRC56Q8IYG6 542 aaPredicted RBP12.1□□□□□ -0.47
SNX1-201ENST00000261889 FAM181AQ8N9Y4 354 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 COQ8AQ8NI60 647 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 NUS1Q96E22 293 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 ADAP2Q9NPF8 381 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 SLC35C2Q9NQQ7 365 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 CBLCQ9ULV8 474 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 SPAG17Q6Q759 2223 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 A0A1B0GVT2 93 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 OR2W5A6NFC9 320 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 PRRT4C9JH25 899 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 TCRBP04435 133 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 SRPRAP08240 638 aaKnown RBP12.1□□□□□ -0.47
SNX1-201ENST00000261889 ZNF30P17039 623 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 HTRA4P83105 476 aaPredicted RBP12.1□□□□□ -0.47
SNX1-201ENST00000261889 TNK1Q13470 666 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 KCNC3Q14003 757 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 KRT33BQ14525 404 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 MINDY4Q4G0A6 757 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 ZNF805Q5CZA5 627 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 C1orf94Q6P1W5 598 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 SFXN4Q6P4A7 337 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 TMEM65Q6PI78 240 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.1□□□□□ -0.47
SNX1-201ENST00000261889 ZNF671Q8TAW3 534 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 OVCA2Q8WZ82 227 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 ST8SIA2Q92186 375 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 ARRDC3Q96B67 414 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 DHRS9Q9BPW9 319 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 MRPL9Q9BYD2 267 aaKnown RBP12.1□□□□□ -0.47
SNX1-201ENST00000261889 ACOD1A6NK06 481 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 FOXE1O00358 373 aaPredicted RBP12.1□□□□□ -0.47
SNX1-201ENST00000261889 PEX12O00623 359 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 HCN1O60741 890 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 FZD7O75084 574 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 PCDH8O95206 1070 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 SLC6A1P30531 599 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 MAPK9P45984 424 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 SLC25A25Q6KCM7 469 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 LINGO2Q7L985 606 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 SP7Q8TDD2 431 aaPredicted RBP12.1□□□□□ -0.47
SNX1-201ENST00000261889 POP5Q969H6 163 aaKnown RBP12.1□□□□□ -0.47
SNX1-201ENST00000261889 CXorf58Q96LI9 332 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 OR7D2Q96RA2 312 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 IFT27Q9BW83 186 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 KLK11Q9UBX7 282 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 ING4Q9UNL4 249 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 LIPT1Q9Y234 373 aa12.1□□□□□ -0.47
SNX1-201ENST00000261889 MED12Q93074 2177 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 SURF4O15260 269 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 RAD1O60671 282 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 ZGLP1P0C6A0 271 aa12.09□□□□□ -0.47
SNX1-201ENST00000261889 CSF2RAP15509 400 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms