RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PPP1R16AQ96I34 528 aa7.26□□□□□ -1.25
GPNMB-201ENST00000258733 RDH12Q96NR8 316 aa7.26□□□□□ -1.25
GPNMB-201ENST00000258733 NAA11Q9BSU3 229 aaPredicted RBP7.26□□□□□ -1.25
GPNMB-201ENST00000258733 SRMSQ9H3Y6 488 aa7.26□□□□□ -1.25
GPNMB-201ENST00000258733 C3orf14Q9HBI5 128 aa7.26□□□□□ -1.25
GPNMB-201ENST00000258733 CSNK1G1Q9HCP0 422 aa7.26□□□□□ -1.25
GPNMB-201ENST00000258733 BARHL2Q9NY43 387 aa7.26□□□□□ -1.25
GPNMB-201ENST00000258733 RASL12Q9NYN1 266 aa7.26□□□□□ -1.25
GPNMB-201ENST00000258733 AHSPQ9NZD4 102 aa7.26□□□□□ -1.25
GPNMB-201ENST00000258733 NLKQ9UBE8 527 aa7.26□□□□□ -1.25
GPNMB-201ENST00000258733 PXDNQ92626 1479 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 PRAMEF33A0A0G2JMD5 474 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 A0A1B0GVI7 797 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 TMEM218A2RU14 115 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 WTIPA6NIX2 430 aaPredicted RBP7.25□□□□□ -1.25
GPNMB-201ENST00000258733 GPR25O00155 361 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 CCL25O15444 150 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 SSNA1O43805 119 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 PRAMEF10O60809 474 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 FZD7O75084 574 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 CSF3P09919 207 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 ELFN1P0C7U0 828 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 DRD1P21728 446 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 FGF7P21781 194 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 FSHRP23945 695 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 NPBWR1P48145 328 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 SREBF2Q12772 1141 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 CBFBQ13951 182 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF235Q14590 738 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 ODF4Q2M2E3 257 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 GAB4Q2WGN9 574 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 SPDYE7PQ495Y7 208 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 B3GNTL1Q67FW5 361 aaPredicted RBP7.25□□□□□ -1.25
GPNMB-201ENST00000258733 MFSD7Q6UXD7 560 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF664Q8N3J9 261 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 OR10K1Q8NGX5 313 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 DVL3Q92997 716 aaPredicted RBP7.25□□□□□ -1.25
GPNMB-201ENST00000258733 HIST1H2BAQ96A08 127 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 CERS2Q96G23 380 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 C5orf30Q96GV9 206 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 TMEM47Q9BQJ4 181 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 CALML5Q9NZT1 146 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 COMMD3Q9UBI1 195 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 PADI1Q9ULC6 663 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 PSG11Q9UQ72 335 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 MAP4K5Q9Y4K4 846 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 KIF13BQ9NQT8 1826 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 C9orf172C9J069 976 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 FZD9O00144 591 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 SLC25A27O95847 323 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 MBPP02686 304 aaPredicted RBP7.25□□□□□ -1.25
GPNMB-201ENST00000258733 THP07101 528 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 SNHG28P0DPA3 235 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 AGXTP21549 392 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 CD72P21854 359 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 CERS1P27544 350 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 MMP12P39900 470 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 STK19P49842 368 aaPredicted RBP7.25□□□□□ -1.25
GPNMB-201ENST00000258733 CYP2J2P51589 502 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 ZBTB6Q15916 424 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 PRAMEF18Q5VWM3 479 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 UQCC3Q6UW78 93 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 VTCN1Q7Z7D3 282 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 LDB1Q86U70 411 aaPredicted RBP7.25□□□□□ -1.25
GPNMB-201ENST00000258733 AMZ2Q86W34 360 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 SLC26A11Q86WA9 606 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 VRK2Q86Y07 508 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 FUNDC1Q8IVP5 155 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 HS3ST5Q8IZT8 346 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 ZCCHC9Q8N567 271 aaKnown RBP7.25□□□□□ -1.25
GPNMB-201ENST00000258733 FBXL13Q8NEE6 735 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 SPPL2BQ8TCT7 592 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 LCN9Q8WX39 176 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 THOC3Q96J01 351 aaKnown RBP7.25□□□□□ -1.25
GPNMB-201ENST00000258733 GPR78Q96P69 363 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 ABHD1Q96SE0 405 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 PAFAH2Q99487 392 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 ABCG5Q9H222 651 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 SMPD4Q9NXE4 827 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 CYP8B1Q9UNU6 501 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 PPP1R3CQ9UQK1 317 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 MSRB2Q9Y3D2 182 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 TNFRSF18Q9Y5U5 241 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 ATP23Q9Y6H3 246 aa7.25□□□□□ -1.25
GPNMB-201ENST00000258733 TCRBV7S2A1N4TA0A589 114 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 ZNF726A6NNF4 738 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 M0QZ24 198 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 RFXAPO00287 272 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 OR2T1O43869 369 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 VPS26AO75436 327 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 STBD1O95210 358 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 MT-ND4LP03901 98 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 NID1P14543 1247 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 PTPN3P26045 913 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 GCLMP48507 274 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 MVKQ03426 396 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 TNFAIP1Q13829 316 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 MPPE1Q53F39 396 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 NAPEPLDQ6IQ20 393 aa7.24□□□□□ -1.25
GPNMB-201ENST00000258733 H3F3CQ6NXT2 135 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms