RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 UBXN2BQ14CS0 331 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 RPS26P11Q5JNZ5 115 aaPredicted RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 GPR157Q5UAW9 335 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 GDF6Q6KF10 455 aaPredicted RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 FAM109AQ8N4B1 249 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 DTWD1Q8N5C7 304 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 OR1S1Q8NH92 325 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 RAB40AQ8WXH6 277 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 MIB2Q96AX9 1013 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 DMRT3Q9NQL9 472 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 HRASLS2Q9NWW9 162 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 SDHAF2Q9NX18 166 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 B3GNT2Q9NY97 397 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 CPNE7Q9UBL6 633 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 ETV7Q9Y603 341 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 LOC102725191A0A1B0GVB3 256 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 A8MU76 341 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 NME4O00746 187 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 INHAP05111 366 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 RAB28P51157 221 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 IL13RA1P78552 427 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 ARHGAP19Q14CB8 494 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 RBMS2Q15434 407 aaKnown RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 AAK1Q2M2I8 961 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 NDUFAF5Q5TEU4 345 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 CMTM8Q8IZV2 173 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 OR5D14Q8NGL3 314 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 GTF2H4Q92759 462 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 MSI2Q96DH6 328 aaKnown RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 C11orf49Q9H6J7 331 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 SIX4Q9UIU6 781 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 MTMR11A4FU01 709 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 LILRB5O75023 590 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 ZNF254O75437 659 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 CAPNS1P04632 268 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 FGF4P08620 206 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 HBQ1P09105 142 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 PPP3CBP16298 524 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 RELAQ04206 551 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 MFGE8Q08431 387 aaPredicted RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 GPR17Q13304 367 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 SELPLGQ14242 412 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 SSX2Q16385 188 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 CPZQ66K79 652 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 B3GNT8Q7Z7M8 397 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 OSTM1Q86WC4 334 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 SULF2Q8IWU5 870 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 TMEM185AQ8NFB2 350 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 OR7G1Q8NGA0 311 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 LILRB4Q8NHJ6 448 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 GPR148Q8TDV2 347 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 INTS14Q96SY0 518 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 NYNRINQ9P2P1 1898 aaKnown RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 INTS1Q8N201 2190 aaKnown RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 AIPO00170 330 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 CYB5BO43169 146 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 LDB2O43679 373 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 ALDOBP05062 364 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 FAM83HQ6ZRV2 1179 aaPredicted RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 C14orf80Q86SX3 495 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 FUBP1Q96AE4 644 aaKnown RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 OR6C2Q9NZP2 312 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 GPR52Q9Y2T5 361 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 FBXO7Q9Y3I1 522 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 MED12Q93074 2177 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 A0A1W2PS29 197 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 A6NHS1 94 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 TMEM212A6NML5 194 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 PPP1R3DO95685 299 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 EGFP01133 1207 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 CPT2P23786 658 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 GIFP27352 417 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 TRA2BP62995 288 aaKnown RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 FOXK1P85037 733 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 MEF2AQ02078 507 aaPredicted RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 MLLT11Q13015 90 aaPredicted RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 LRP8Q14114 963 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 RAET1LQ5VY80 246 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 SLC6A19Q695T7 634 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 OR56B4Q8NH76 319 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 NETO1Q8TDF5 533 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 LSM5Q9Y4Y9 91 aaKnown RBP4.54□□□□□ -1.68
RC3H1-201ENST00000258349 PLXNA2O75051 1894 aa4.54□□□□□ -1.68
RC3H1-201ENST00000258349 CEP250Q9BV73 2442 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 NFKBIEO00221 500 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 AQP2P41181 271 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 NR4A2P43354 598 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 FASLGP48023 281 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 SPINT3P49223 89 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 THBS3P49746 956 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 VEZF1Q14119 521 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 IRF4Q15306 451 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 UBE2UQ5VVX9 321 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 TM9SF4Q92544 642 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 KIAA1143Q96AT1 154 aaPredicted RBP4.53□□□□□ -1.68
RC3H1-201ENST00000258349 SERINC2Q96SA4 455 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 SORT1Q99523 831 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 XYLT2Q9H1B5 865 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 MMP28Q9H239 520 aa4.53□□□□□ -1.68
RC3H1-201ENST00000258349 SEMA4GQ9NTN9 838 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms