RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TUBA1AQ71U36 451 aa15.73■□□□□ 0.11
CDKN1A-201ENST00000244741 SZRD1Q7Z422 152 aa15.73■□□□□ 0.11
CDKN1A-201ENST00000244741 COMTD1Q86VU5 262 aa15.73■□□□□ 0.11
CDKN1A-201ENST00000244741 XAGE5Q8WWM1 108 aa15.73■□□□□ 0.11
CDKN1A-201ENST00000244741 AMDHD1Q96NU7 426 aa15.73■□□□□ 0.11
CDKN1A-201ENST00000244741 BBS4Q96RK4 519 aa15.73■□□□□ 0.11
CDKN1A-201ENST00000244741 OR51E2Q9H255 320 aa15.73■□□□□ 0.11
CDKN1A-201ENST00000244741 OR51I1Q9H343 314 aa15.73■□□□□ 0.11
CDKN1A-201ENST00000244741 WDR70Q9NW82 654 aa15.73■□□□□ 0.11
CDKN1A-201ENST00000244741 SH3D21A4FU49 640 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 CNOT3O75175 753 aaKnown RBP15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 SOX14O95416 240 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 H1F0P07305 194 aaKnown RBP15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 HBQ1P09105 142 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 SPINK2P20155 84 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 GSTM5P46439 218 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 RGS6P49758 472 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 NCBP2P52298 156 aaKnown RBP eCLIP15.72■□□□□ 0.118e-7■□□□□ 8
CDKN1A-201ENST00000244741 EIF3IQ13347 325 aaKnown RBP15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 MLC1Q15049 377 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 LTB4RQ15722 352 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 DCST1Q5T197 706 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 TIPARPQ7Z3E1 657 aaKnown RBP15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 AMER2Q8N7J2 671 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 OR4K14Q8NGD5 310 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 ANKRD9Q96BM1 317 aaPredicted RBP15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 OTUB1Q96FW1 271 aaPredicted RBP15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 CRELD1Q96HD1 420 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 DHRS1Q96LJ7 313 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 OR5M11Q96RB7 305 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 IL4I1Q96RQ9 567 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 ZNF607Q96SK3 696 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 PRTFDC1Q9NRG1 225 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 LANCL2Q9NS86 450 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 CLN6Q9NWW5 311 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 SEC14L3Q9UDX4 400 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 MKL2Q9ULH7 1088 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 ZNF780BQ9Y6R6 833 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 CEP295Q9C0D2 2601 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 LOC100506127A0A0U1RQW1 187 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 EFCAB10A6NFE3 127 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 METTL15A6NJ78 407 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 OR10H3O60404 316 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 MPZL2O60487 215 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 NME6O75414 186 aaPredicted RBP15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 KLK3P07288 261 aaPredicted RBP15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 HSMCR30P0CW71 290 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 DBTP11182 482 aaKnown RBP15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 OSMP13725 252 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 DOC2BQ14184 412 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 TMEM164Q5U3C3 297 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 STT3BQ8TCJ2 826 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 TSLPQ969D9 159 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 SLC35G5Q96KT7 338 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 PTCHD1Q96NR3 888 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 CDCA4Q9BXL8 241 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 EHD3Q9NZN3 535 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 ENTPD4Q9Y227 616 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 IFT52Q9Y366 437 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 PCDHGA3Q9Y5H0 932 aa15.72■□□□□ 0.11
CDKN1A-201ENST00000244741 ENTPD6O75354 484 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 GPC1P35052 558 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 STX4Q12846 297 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 ZNF404Q494X3 552 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 USP43Q70EL4 1123 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 TMPRSS7Q7RTY8 843 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 WDR53Q7Z5U6 358 aaPredicted RBP15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 HMGN2P46Q86SG4 172 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 OR9A2Q8NGT5 310 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 SUN3Q8TAQ9 357 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 NEURL2Q9BR09 285 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 DDA1Q9BW61 102 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 SEMA3GQ9NS98 782 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 CNOT2Q9NZN8 540 aaKnown RBP15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 P2RX2Q9UBL9 471 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 MGAT4BQ9UQ53 548 aa15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 GPC6Q9Y625 555 aaPredicted RBP15.71■□□□□ 0.11
CDKN1A-201ENST00000244741 FAAHO00519 579 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 ZGLP1P0C6A0 271 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 NR2F1P10589 423 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 SLC15A1P46059 708 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 FOXC1Q12948 553 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 PIN1Q13526 163 aaPredicted RBP15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 DGAT2L6Q6ZPD8 337 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 SIMC1Q8NDZ2 872 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 SLC7A13Q8TCU3 470 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 KAT2AQ92830 837 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 ZNF681Q96N22 645 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 FUZQ9BT04 418 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 CENPOQ9BU64 300 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 MMP27Q9H306 513 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 ZCCHC3Q9NUD5 404 aaKnown RBP15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 ACAD8Q9UKU7 415 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 A4GNTQ9UNA3 340 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 MRPS33Q9Y291 106 aaKnown RBP15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 M0R3H8 397 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 CLDN4O14493 209 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 SERPINB7O75635 380 aa15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 OXSR1O95747 527 aaPredicted RBP15.7■□□□□ 0.1
CDKN1A-201ENST00000244741 GPR75O95800 540 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms