RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 RNF144AP50876 292 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 PPP2CBP62714 309 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 PPP2CAP67775 309 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 EEF1A1P68104 462 aaKnown RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 RUNX2Q13950 521 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 EOGTQ5NDL2 527 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 FBXO42Q6P3S6 717 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 ZNF322Q6U7Q0 402 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 RD3Q7Z3Z2 195 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 ABI3BPQ7Z7G0 1075 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 Q8N402 240 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 ENKURQ8TC29 256 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 NT5CQ8TCD5 201 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 DNAJA4Q8WW22 397 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 SLC7A6Q92536 515 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 FRMD6Q96NE9 622 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 COQ7Q99807 217 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 SOSTQ9BQB4 213 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 PRSS27Q9BQR3 290 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 ZNF624Q9P2J8 865 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 NUFIP1Q9UHK0 495 aaKnown RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 MYO9BQ13459 2157 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 A0A1W2PQF6 199 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 ZC3H12DA2A288 527 aaKnown RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 HMGN1P05114 100 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 GKN3PP0CG01 181 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 TRAPPC2P0DI81 140 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 TRAPPC2BP0DI82 140 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 ID2Q02363 134 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 DLX2Q07687 328 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 DBPQ10586 325 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 ADAM15Q13444 863 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 IL18Q14116 193 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 MAPK14Q16539 360 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 TRMT12Q53H54 448 aaKnown RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 PLBD1Q6P4A8 553 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 WDR88Q6ZMY6 472 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 NLGN4YQ8NFZ3 816 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 CCL4L1Q8NHW4 92 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 NACC2Q96BF6 587 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 SENP5Q96HI0 755 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 OR52D1Q9H346 318 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 SRMSQ9H3Y6 488 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 MED20Q9H944 212 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 KRCC1Q9NPI7 259 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 PLSCR3Q9NRY6 295 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 PHF11Q9UIL8 331 aa13.38□□□□□ -0.27
HIF3A-202ENST00000244303 ARHGEF17Q96PE2 2063 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-202ENST00000244303 J3QRE1 110 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 CTSVO60911 334 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 KLF8O95600 359 aaPredicted RBP13.37□□□□□ -0.27
HIF3A-202ENST00000244303 EGFP01133 1207 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 FXYD6P3P58550 94 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 DUSP8Q13202 625 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 SUZ12Q15022 739 aaKnown RBP13.37□□□□□ -0.27
HIF3A-202ENST00000244303 SNAP47Q5SQN1 464 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 TRIQKQ629K1 86 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 SMARCD3Q6STE5 483 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 ENPP7Q6UWV6 458 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 TMEM91Q6ZNR0 172 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 RANBP3LQ86VV4 465 aaPredicted RBP13.37□□□□□ -0.27
HIF3A-202ENST00000244303 TRIM48Q8IWZ4 208 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 SHISA5Q8N114 240 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 C19orf18Q8NEA5 215 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 TOR1AIP2Q8NFQ8 470 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 OR7G1Q8NGA0 311 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 PFN4Q8NHR9 129 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 FANK1Q8TC84 345 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 UBASH3BQ8TF42 649 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 OR1E3Q8WZA6 343 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 ART5Q96L15 291 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 SERINC2Q96SA4 455 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 RNF32Q9H0A6 362 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 ENKD1Q9H0I2 346 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 RANGRFQ9HD47 186 aaPredicted RBP13.37□□□□□ -0.27
HIF3A-202ENST00000244303 B3GAT2Q9NPZ5 323 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 DAPP1Q9UN19 280 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 POLHQ9Y253 713 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 CA5BQ9Y2D0 317 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 TICRRQ7Z2Z1 1910 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 ZNF860A6NHJ4 632 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 UNC119BA6NIH7 251 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 C12orf71A8MTZ7 269 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 HCN1O60741 890 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 HLA-DQB1P01920 261 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 SMIM10L1P0DMW3 83 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 GAAP10253 952 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 HOXB2P14652 356 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 MAKP20794 623 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 PAICSP22234 425 aaKnown RBP13.37□□□□□ -0.27
HIF3A-202ENST00000244303 HTR2AP28223 471 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 EVX1P49640 407 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 CAMK2BQ13554 666 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 QPRTQ15274 297 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 RAB30Q15771 203 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 EIPR1Q53HC9 387 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 GLCCI1Q86VQ1 547 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 FLVCR1-AS1Q8TAF5 88 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 TM4SF19Q96DZ7 209 aa13.37□□□□□ -0.27
HIF3A-202ENST00000244303 SMIM10Q96HG1 83 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms