RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 ELNP15502 786 aa13.74□□□□□ -0.21
PTPRA-201ENST00000216877 CNR1P21554 472 aa13.74□□□□□ -0.21
PTPRA-201ENST00000216877 HTR2AP28223 471 aa13.74□□□□□ -0.21
PTPRA-201ENST00000216877 DOC2AQ14183 400 aa13.74□□□□□ -0.21
PTPRA-201ENST00000216877 NDUFAF6Q330K2 333 aa13.74□□□□□ -0.21
PTPRA-201ENST00000216877 TMED4Q7Z7H5 227 aa13.74□□□□□ -0.21
PTPRA-201ENST00000216877 ADGRG2Q8IZP9 1017 aa13.74□□□□□ -0.21
PTPRA-201ENST00000216877 OR13C5Q8NGS8 318 aa13.74□□□□□ -0.21
PTPRA-201ENST00000216877 SMAP2Q8WU79 429 aaPredicted RBP13.74□□□□□ -0.21
PTPRA-201ENST00000216877 TCTEX1D2Q8WW35 142 aa13.74□□□□□ -0.21
PTPRA-201ENST00000216877 BRI3BPQ8WY22 251 aa13.74□□□□□ -0.21
PTPRA-201ENST00000216877 GULP1Q9UBP9 304 aa13.74□□□□□ -0.21
PTPRA-201ENST00000216877 ZNF629Q9UEG4 869 aaPredicted RBP13.74□□□□□ -0.21
PTPRA-201ENST00000216877 PRSS21Q9Y6M0 314 aa13.74□□□□□ -0.21
PTPRA-201ENST00000216877 STX11O75558 287 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 REM1O75628 298 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 ZDHHC11BP0C7U3 371 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 TYMPP19971 482 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 PRKAR1BP31321 381 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 BMP8BP34820 402 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 BUD31P41223 144 aaPredicted RBP13.73□□□□□ -0.21
PTPRA-201ENST00000216877 CLDN12P56749 244 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 ZNF234Q14588 700 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 NCMAPQ5T1S8 102 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 BMP8AQ7Z5Y6 402 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 OR5D16Q8NGK9 328 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 XAGE5Q8WWM1 108 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 EDARADDQ8WWZ3 215 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 POLDIP3Q9BY77 421 aaKnown RBP13.73□□□□□ -0.21
PTPRA-201ENST00000216877 OR51V1Q9H2C8 321 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 CA5BQ9Y2D0 317 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 OARD1Q9Y530 152 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 RHOQP17081 205 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 ELAVL4P26378 380 aaKnown RBP13.73□□□□□ -0.21
PTPRA-201ENST00000216877 HOXA11P31270 313 aaPredicted RBP13.73□□□□□ -0.21
PTPRA-201ENST00000216877 ART1P52961 327 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 DLX5P56178 289 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 RAB40BQ12829 278 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 C10orf120Q5SQS8 335 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 SLC29A4Q7RTT9 530 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 TAF8Q7Z7C8 310 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 GAL3ST1Q99999 423 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 EQTNQ9NQ60 294 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 A0A1W2PRB8 838 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 ZC3H12DA2A288 527 aaKnown RBP13.73□□□□□ -0.21
PTPRA-201ENST00000216877 TMEM218A2RU14 115 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 ANKRD61A6NGH8 418 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 OR6C65A6NJZ3 312 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 FFAR1O14842 300 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 HIST1H2ABP04908 130 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 NSG1P42857 185 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 CTSOP43234 321 aaPredicted RBP13.73□□□□□ -0.21
PTPRA-201ENST00000216877 PXNP49023 591 aaPredicted RBP13.73□□□□□ -0.21
PTPRA-201ENST00000216877 PRKAG1P54619 331 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 AFMIDQ63HM1 303 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 PODNL1Q6PEZ8 512 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 RPTNQ6XPR3 784 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 HIST3H2AQ7L7L0 130 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 TOP6BLQ8N6T0 577 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 OR52I2Q8NH67 350 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 HIST1H2ACQ93077 130 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 PPCDCQ96CD2 204 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 SGK2Q9HBY8 427 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 HRASLSQ9HDD0 168 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 MEPEQ9NQ76 525 aaPredicted RBP13.73□□□□□ -0.21
PTPRA-201ENST00000216877 MIEF1Q9NQG6 463 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 PIPOXQ9P0Z9 390 aa13.73□□□□□ -0.21
PTPRA-201ENST00000216877 RUVBL1Q9Y265 456 aaKnown RBP13.73□□□□□ -0.21
PTPRA-201ENST00000216877 DAPL1A0PJW8 107 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 PMS2P1A4D2B8 440 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 PRKRAO75569 313 aaKnown RBP13.72□□□□□ -0.21
PTPRA-201ENST00000216877 PCSK1P29120 753 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 TMEM255AQ5JRV8 349 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 ADAM5Q6NVV9 412 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 DPPA2Q7Z7J5 298 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 ORAI1Q96D31 301 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 PIGQQ9BRB3 760 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 TLNRD1Q9H1K6 362 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 C2orf42Q9NWW7 574 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 DNAH12Q6ZR08 3092 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 H3BSH0 61 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 NR2C1P13056 603 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 BDKRB2P30411 391 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 MAPK9P45984 424 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 CCR9P51686 369 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 ACVR1Q04771 509 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 KRT33BQ14525 404 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 TGIF1Q15583 401 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 ZBTB6Q15916 424 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 NUDT13Q86X67 352 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 OR11G2Q8NGC1 345 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 LINC01599Q8WXQ3 324 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 TEX12Q9BXU0 123 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 SLC13A4Q9UKG4 626 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 KCNK7Q9Y2U2 307 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 TMEM129A0AVI4 362 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 MEIS3P1A6NDR6 274 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 TMEM229AB2RXF0 380 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 UBL3O95164 117 aa13.72□□□□□ -0.21
PTPRA-201ENST00000216877 PRG2P13727 222 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms