RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 PRODHO43272 600 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 MSL3P1P0C860 447 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 CSF2RBP32927 897 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 UGT2B10P36537 528 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 CLK1P49759 484 aaKnown RBP27.46■■□□□ 1.99
PABPN1-201ENST00000216727 BMXP51813 675 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 PGDP52209 483 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 SHBQ15464 509 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 C19orf48Q6RUI8 117 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 PRSS42Q7Z5A4 293 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 BORCS5Q969J3 196 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 ST6GALNAC1Q9NSC7 600 aaPredicted RBP27.46■■□□□ 1.99
PABPN1-201ENST00000216727 MED17Q9NVC6 651 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 PRODH2Q9UF12 536 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 DIMT1Q9UNQ2 313 aaKnown RBP27.46■■□□□ 1.99
PABPN1-201ENST00000216727 USP34Q70CQ2 3546 aa27.46■■□□□ 1.99
PABPN1-201ENST00000216727 A0A1B0GVG6 124 aa27.45■■□□□ 1.99
PABPN1-201ENST00000216727 CDC42EP2O14613 210 aa27.45■■□□□ 1.99
PABPN1-201ENST00000216727 HYAL3O43820 417 aaPredicted RBP27.45■■□□□ 1.99
PABPN1-201ENST00000216727 SERPINB10P48595 397 aa27.45■■□□□ 1.99
PABPN1-201ENST00000216727 RGS19P49795 217 aa27.45■■□□□ 1.99
PABPN1-201ENST00000216727 RNF144AP50876 292 aaPredicted RBP27.45■■□□□ 1.99
PABPN1-201ENST00000216727 PSMD4P55036 377 aaKnown RBP27.45■■□□□ 1.99
PABPN1-201ENST00000216727 CLEC12AQ5QGZ9 265 aa27.45■■□□□ 1.99
PABPN1-201ENST00000216727 WDR74Q6RFH5 385 aaPredicted RBP27.45■■□□□ 1.99
PABPN1-201ENST00000216727 KMT5CQ86Y97 462 aa27.45■■□□□ 1.99
PABPN1-201ENST00000216727 CYP4Z2PQ8N1L4 340 aa27.45■■□□□ 1.99
PABPN1-201ENST00000216727 OR7G1Q8NGA0 311 aa27.45■■□□□ 1.99
PABPN1-201ENST00000216727 ZHX1-C8orf76Q96EF9 292 aa27.45■■□□□ 1.99
PABPN1-201ENST00000216727 OCEL1Q9H607 264 aa27.45■■□□□ 1.99
PABPN1-201ENST00000216727 DNAJB12Q9NXW2 375 aaKnown RBP27.45■■□□□ 1.99
PABPN1-201ENST00000216727 HSMCR30P0CW71 290 aa27.45■■□□□ 1.98
PABPN1-201ENST00000216727 TUBA1BP68363 451 aa27.45■■□□□ 1.98
PABPN1-201ENST00000216727 PRKCDQ05655 676 aa27.45■■□□□ 1.98
PABPN1-201ENST00000216727 KLHL22Q53GT1 634 aa27.45■■□□□ 1.98
PABPN1-201ENST00000216727 TUBA1AQ71U36 451 aa27.45■■□□□ 1.98
PABPN1-201ENST00000216727 OR4Q3Q8NH05 313 aa27.45■■□□□ 1.98
PABPN1-201ENST00000216727 MND1Q9BWT6 205 aa27.45■■□□□ 1.98
PABPN1-201ENST00000216727 IRGMA1A4Y4 181 aa27.44■■□□□ 1.98
PABPN1-201ENST00000216727 KDM4EB2RXH2 506 aaPredicted RBP27.44■■□□□ 1.98
PABPN1-201ENST00000216727 CLPSP04118 112 aa27.44■■□□□ 1.98
PABPN1-201ENST00000216727 LIMK1P53667 647 aa27.44■■□□□ 1.98
PABPN1-201ENST00000216727 SLC34A3Q8N130 599 aa27.44■■□□□ 1.98
PABPN1-201ENST00000216727 Q8N9G6 341 aaPredicted RBP27.44■■□□□ 1.98
PABPN1-201ENST00000216727 PROKR2Q8NFJ6 384 aa27.44■■□□□ 1.98
PABPN1-201ENST00000216727 OR1L3Q8NH93 324 aa27.44■■□□□ 1.98
PABPN1-201ENST00000216727 BRIX1Q8TDN6 353 aaKnown RBP27.44■■□□□ 1.98
PABPN1-201ENST00000216727 PTCHD1Q96NR3 888 aa27.44■■□□□ 1.98
PABPN1-201ENST00000216727 PRDM6Q9NQX0 595 aa27.44■■□□□ 1.98
PABPN1-201ENST00000216727 OSGIN1Q9UJX0 560 aa27.44■■□□□ 1.98
PABPN1-201ENST00000216727 CBLCQ9ULV8 474 aa27.44■■□□□ 1.98
PABPN1-201ENST00000216727 A0A0B4J2E0 115 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 A0A1B0GX12 115 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 ATP12AP54707 1039 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 BNC1Q01954 994 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 FGFBP1Q14512 234 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 PGGHGQ32M88 737 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 LYSMD4Q5XG99 296 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 SLC30A6Q6NXT4 461 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 ZBTB46Q86UZ6 589 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 CMIPQ8IY22 773 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 NANOGP1Q8N7R0 232 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 ZNF614Q8N883 585 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 TMEM5Q9Y2B1 443 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 PCDHGA3Q9Y5H0 932 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 UNC119BA6NIH7 251 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 SURF4O15260 269 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 NADKO95544 446 aaPredicted RBP27.43■■□□□ 1.98
PABPN1-201ENST00000216727 ALAS2P22557 587 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 ACAA2P42765 397 aaKnown RBP27.43■■□□□ 1.98
PABPN1-201ENST00000216727 RAB40BQ12829 278 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 TMEM44Q2T9K0 475 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 LSMEM1Q8N8F7 131 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 ANKK1Q8NFD2 765 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 OR2T33Q8NG76 320 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 OR52I1Q8NGK6 324 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 HS6ST2Q96MM7 605 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 TAPBPLQ9BX59 468 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 TRIM2Q9C040 744 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 SIDT1Q9NXL6 827 aaKnown RBP27.43■■□□□ 1.98
PABPN1-201ENST00000216727 CLEC2DQ9UHP7 191 aa27.43■■□□□ 1.98
PABPN1-201ENST00000216727 C17orf105B2RV13 164 aa27.42■■□□□ 1.98
PABPN1-201ENST00000216727 CCRL2O00421 344 aa27.42■■□□□ 1.98
PABPN1-201ENST00000216727 CHP2O43745 196 aa27.42■■□□□ 1.98
PABPN1-201ENST00000216727 RAB36O95755 333 aa27.42■■□□□ 1.98
PABPN1-201ENST00000216727 SCG5P05408 212 aa27.42■■□□□ 1.98
PABPN1-201ENST00000216727 OR1D4P47884 311 aa27.42■■□□□ 1.98
PABPN1-201ENST00000216727 CPEB4Q17RY0 729 aaKnown RBP eCLIP27.42■■□□□ 1.981e-6■■■□□ 16.9
PABPN1-201ENST00000216727 MINDY4Q4G0A6 757 aa27.42■■□□□ 1.98
PABPN1-201ENST00000216727 GPR135Q8IZ08 494 aa27.42■■□□□ 1.98
PABPN1-201ENST00000216727 DCSTAMPQ9H295 470 aa27.42■■□□□ 1.98
PABPN1-201ENST00000216727 OR10H1Q9Y4A9 318 aa27.42■■□□□ 1.98
PABPN1-201ENST00000216727 HMGN1P05114 100 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 GRK5P34947 590 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 GAS1P54826 345 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 DSG2Q14126 1118 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 SPHARQ15513 63 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 SNAP47Q5SQN1 464 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 TSSK4Q6SA08 328 aa27.41■■□□□ 1.98
PABPN1-201ENST00000216727 QSOX2Q6ZRP7 698 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms