RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 PCMT1P22061 227 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 PSMD4P55036 377 aaKnown RBP15.99■□□□□ 0.15
PHGDH-208ENST00000641023 TSPAN31Q12999 210 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 ELAVL1Q15717 326 aaKnown RBP15.99■□□□□ 0.15
PHGDH-208ENST00000641023 NSDHLQ15738 373 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 GPR107Q5VW38 600 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 PRICKLE2Q7Z3G6 844 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 OR2I1PQ8NGU4 316 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 TSLPQ969D9 159 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 MYDGFQ969H8 173 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 ISOC1Q96CN7 298 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 OR6C1Q96RD1 312 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 LHPPQ9H008 270 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 C11orf16Q9NQ32 467 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 C14orf105Q9NVL8 296 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 PCDHGA10Q9Y5H3 936 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 SEC16AO15027 2179 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 TCRBV16S1A1N1A0A5B0 115 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 THY1P04216 161 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 CKMT1AP12532 417 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 PRG2P13727 222 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 RORAP35398 523 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 DUSP3P51452 185 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-208ENST00000641023 SLC37A1P57057 533 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 RHAGQ02094 409 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 MVKQ03426 396 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 OR1Q1Q15612 314 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 GTF2IRD2BQ6EKJ0 949 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 MBOAT2Q6ZWT7 520 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 GTF2IRD2Q86UP8 949 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 GRAMD2AQ8IUY3 354 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 BCORP1Q8N888 145 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 RORBQ92753 470 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 CLIP3Q96DZ5 547 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 SLC46A1Q96NT5 459 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 GPA33Q99795 319 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 RHNO1Q9BSD3 238 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 COPS4Q9BT78 406 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 OR8D2Q9GZM6 311 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-208ENST00000641023 CLN6Q9NWW5 311 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 PSORS1C1Q9UIG5 152 aa15.99■□□□□ 0.15
PHGDH-208ENST00000641023 SYNDIG1LA6NDD5 238 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 A8MUA0 341 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 POLR1CO15160 346 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-208ENST00000641023 CLPSP04118 112 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 TP53P04637 393 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-208ENST00000641023 IGFBP1P08833 259 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-208ENST00000641023 DCKP27707 260 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 PEX19P40855 299 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 ATP12AP54707 1039 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 ZNF141Q15928 474 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 NNATQ16517 81 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 OR8J1Q8NGP2 316 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 IFI44Q8TCB0 444 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 DAZLQ92904 295 aaKnown RBP15.98■□□□□ 0.15
PHGDH-208ENST00000641023 MUL1Q969V5 352 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 Q96MT0 163 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 TMEM27Q9HBJ8 222 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 AMBNQ9NP70 447 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 RARRES3Q9UL19 164 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 MKL2Q9ULH7 1088 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 ZNF99A8MXY4 864 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-208ENST00000641023 NOL3O60936 208 aaKnown RBP15.98■□□□□ 0.15
PHGDH-208ENST00000641023 OMPP47874 163 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 GIPRP48546 466 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 RNF144AP50876 292 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-208ENST00000641023 SNRPGP62308 76 aaKnown RBP15.98■□□□□ 0.15
PHGDH-208ENST00000641023 CLPPQ16740 277 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-208ENST00000641023 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.98■□□□□ 0.15
PHGDH-208ENST00000641023 C12orf73Q69YU5 71 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 NRMQ8IXM6 262 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 TMEM255BQ8WV15 326 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 SLC35B4Q969S0 331 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 FAM46AQ96IP4 442 aaKnown RBP15.98■□□□□ 0.15
PHGDH-208ENST00000641023 ART5Q96L15 291 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 CCDC74BQ96LY2 380 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 ZNF559Q9BR84 538 aa15.98■□□□□ 0.15
PHGDH-208ENST00000641023 GTPBP2Q9BX10 602 aaKnown RBP15.98■□□□□ 0.15
PHGDH-208ENST00000641023 SPEGQ15772 3267 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 M0R129 80 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 MT-ND2P03891 347 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 FPR3P25089 353 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 HTR2AP28223 471 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 SLC5A2P31639 672 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 PPICP45877 212 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 SMSP52788 366 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 FGFBP1Q14512 234 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 ZNF528Q3MIS6 628 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 ZNF613Q6PF04 617 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 RASSF6Q6ZTQ3 369 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 CMIPQ8IY22 773 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 PRSS58Q8IYP2 241 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 RNF113BQ8IZP6 322 aaKnown RBP15.97■□□□□ 0.15
PHGDH-208ENST00000641023 TEX47Q8TBZ9 253 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 SLC2A12Q8TD20 617 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 FAR1Q8WVX9 515 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 GGHQ92820 318 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 CNIH4Q9P003 139 aa15.97■□□□□ 0.15
PHGDH-208ENST00000641023 WARS2Q9UGM6 360 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms