RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 P3H2Q8IVL5 708 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 C10orf107Q8IVU9 208 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 LRRC75A-AS1Q8N1F1 130 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 CDRT4Q8N9R6 151 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 NUP43Q8NFH3 380 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 OR4C3Q8NH37 302 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 CEP70Q8NHQ1 597 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 CLHC1Q8NHS4 586 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 ZFP28Q8NHY6 868 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 UBLCP1Q8WVY7 318 aaPredicted RBP15.13■□□□□ 0.01
SMN2-216ENST00000638794 PIGTQ969N2 578 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 PPCDCQ96CD2 204 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 ZBED6CLQ96FA7 236 aaPredicted RBP15.13■□□□□ 0.01
SMN2-216ENST00000638794 MS4A4EQ96PG1 132 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 HS3ST6Q96QI5 342 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 NPAS1Q99742 590 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 PIP5K1AQ99755 562 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 KLHL4Q9C0H6 718 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 TUBB1Q9H4B7 451 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 REEP4Q9H6H4 257 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 SH3BP4Q9P0V3 963 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 NTMQ9P121 344 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 BAIAP2L1Q9UHR4 511 aa15.13■□□□□ 0.01
SMN2-216ENST00000638794 NDUFB5O43674 189 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 TBX19O60806 448 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 NGFRP08138 427 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 KRT4P19013 534 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 TBXA2RP21731 343 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 LOXP28300 417 aaPredicted RBP15.12■□□□□ 0.01
SMN2-216ENST00000638794 FRKP42685 505 aaPredicted RBP15.12■□□□□ 0.01
SMN2-216ENST00000638794 MANFP55145 182 aaKnown RBP15.12■□□□□ 0.01
SMN2-216ENST00000638794 RPL38P63173 70 aaKnown RBP15.12■□□□□ 0.01
SMN2-216ENST00000638794 PDE7AQ13946 482 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 PCLAFQ15004 111 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 ACKR1Q16570 336 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 DUSP5Q16690 384 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.12■□□□□ 0.01
SMN2-216ENST00000638794 EXOC3L2Q2M3D2 409 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 RFTN2Q52LD8 501 aaPredicted RBP15.12■□□□□ 0.01
SMN2-216ENST00000638794 FIGNL1Q6PIW4 674 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 RNF165Q6ZSG1 346 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 TDRPQ86YL5 185 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 C4orf33Q8N1A6 199 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 GTPBP8Q8N3Z3 284 aaPredicted RBP15.12■□□□□ 0.01
SMN2-216ENST00000638794 GATSQ8NAP1 163 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 SLC16A11Q8NCK7 471 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 LRRN4CLQ8ND94 238 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 OR10D3Q8NH80 312 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 EPS8L3Q8TE67 593 aaKnown RBP15.12■□□□□ 0.01
SMN2-216ENST00000638794 ADGRG7Q96K78 797 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 CCL19Q99731 98 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 GATA5Q9BWX5 397 aaPredicted RBP15.12■□□□□ 0.01
SMN2-216ENST00000638794 PRRG4Q9BZD6 226 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 ZNF395Q9H8N7 513 aaPredicted RBP15.12■□□□□ 0.01
SMN2-216ENST00000638794 FBXO34Q9NWN3 711 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 STOML1Q9UBI4 398 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 CLEC4AQ9UMR7 237 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 EMC9Q9Y3B6 208 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 DNHD1Q96M86 4753 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 FN1P02751 2386 aaKnown RBP15.12■□□□□ 0.01
SMN2-216ENST00000638794 ZANQ9Y493 2812 aa15.12■□□□□ 0.01
SMN2-216ENST00000638794 A0A087WZY1 265 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 A0A1W2PRB8 838 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 KCNK2O95069 426 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 OPN1LWP04000 364 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 LINC00032P0C843 101 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 NEFHP12036 1026 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 EFNA1P20827 205 aaPredicted RBP15.11■□□□□ 0.01
SMN2-216ENST00000638794 FPR1P21462 350 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 PSMA4P25789 261 aaKnown RBP15.11■□□□□ 0.01
SMN2-216ENST00000638794 SLC18A2Q05940 514 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 CTU2Q2VPK5 515 aaKnown RBP15.11■□□□□ 0.01
SMN2-216ENST00000638794 KANK2Q63ZY3 851 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 MFSD12Q6NUT3 480 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 CLEC9AQ6UXN8 241 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 WDR75Q8IWA0 830 aaKnown RBP15.11■□□□□ 0.01
SMN2-216ENST00000638794 OR6K3Q8NGY3 331 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 FAM110BQ8TC76 370 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 CAVIN3Q969G5 261 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 ZBTB8AQ96BR9 441 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 OTUB1Q96FW1 271 aaPredicted RBP15.11■□□□□ 0.01
SMN2-216ENST00000638794 C16orf58Q96GQ5 468 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 SH3YL1Q96HL8 342 aaPredicted RBP15.11■□□□□ 0.01
SMN2-216ENST00000638794 GMPPAQ96IJ6 420 aaPredicted RBP15.11■□□□□ 0.01
SMN2-216ENST00000638794 IQCGQ9H095 443 aaKnown RBP15.11■□□□□ 0.01
SMN2-216ENST00000638794 ACSS1Q9NUB1 689 aaPredicted RBP15.11■□□□□ 0.01
SMN2-216ENST00000638794 MED17Q9NVC6 651 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 DNAJC15Q9Y5T4 150 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 TLN2Q9Y4G6 2542 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 PRR14LQ5THK1 2151 aa15.11■□□□□ 0.01
SMN2-216ENST00000638794 UQCRHLA0A096LP55 91 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 C7orf72A4D263 438 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 LSM1O15116 133 aaKnown RBP15.1■□□□□ 0.01
SMN2-216ENST00000638794 SS18L1O75177 396 aaPredicted RBP15.1■□□□□ 0.01
SMN2-216ENST00000638794 PLGP00747 810 aaPredicted RBP15.1■□□□□ 0.01
SMN2-216ENST00000638794 THBDP07204 575 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 PLPPR5Q32ZL2 321 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 GALNTL6Q49A17 601 aa15.1■□□□□ 0.01
SMN2-216ENST00000638794 EXOSC6Q5RKV6 272 aaKnown RBP15.1■□□□□ 0.01
SMN2-216ENST00000638794 C20orf204Q6ZNR8 217 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms