RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 MTFR2Q6P444 385 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 IGFL2Q6UWQ7 119 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 PRSS41Q7RTY9 318 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 MSRB3Q8IXL7 192 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 HAS2Q92819 552 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 TMIGD2Q96BF3 282 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 NACC2Q96BF6 587 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 MTFMTQ96DP5 389 aaKnown RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 DTNBP1Q96EV8 351 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 SMPD3Q9NY59 655 aaPredicted RBP4.48□□□□□ -1.69
LINC00550-201ENST00000629293 USF3Q68DE3 2245 aa4.48□□□□□ -1.69
LINC00550-201ENST00000629293 KCNE1BA0A087WTH5 132 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 IGHV1-45A0A0A0MS14 117 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 A0A1B0GVG6 124 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 A8MUA0 341 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 NPIPB8E9PQR5 432 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 H0YAE9 185 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 K7EPI3 171 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 SGK494L7N484 410 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 EIF3FO00303 357 aaPredicted RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 TPST1O60507 370 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 C1orf105O95561 183 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 CSTBP04080 98 aaKnown RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 GGT5P36269 586 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 CD96P40200 585 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 HNF4AP41235 474 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 XCR1P46094 333 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 HNRNPFP52597 415 aaKnown RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 DGKQP52824 942 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 CSNK1G2P78368 415 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 ADORA2A-AS1P86434 159 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 ACER2Q5QJU3 275 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 PRAMEF9Q5VWM5 478 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 ATG9BQ674R7 924 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 DHRS4L2Q6PKH6 230 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 RPTNQ6XPR3 784 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 PATL1Q86TB9 770 aaKnown RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 OR2A1Q8NGT9 310 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 SLC13A3Q8WWT9 602 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 GTF2H4Q92759 462 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 FBXL20Q96IG2 436 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 NSMCE2Q96MF7 247 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF583Q96ND8 569 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 PRAP1Q96NZ9 151 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 SIGLEC12Q96PQ1 595 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 HBEGFQ99075 208 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 UTP23Q9BRU9 249 aaKnown RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 CHID1Q9BWS9 393 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 SLC26A1Q9H2B4 701 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 GORASP2Q9H8Y8 452 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 SMURF2Q9HAU4 748 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 VAPAQ9P0L0 249 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 ABI3Q9P2A4 366 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 RSL24D1Q9UHA3 163 aaKnown RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 KLF2Q9Y5W3 355 aaPredicted RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 A0A087WXM4 84 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 A0A1W2PR48 441 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 TRIM64BA6NI03 449 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 VSTM2BA6NLU5 285 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 SLC28A1O00337 649 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 MANBAO00462 879 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 RGS14O43566 566 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 CLDN14O95500 239 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 ZNF24P17028 368 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 PRPH2P23942 346 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 HMOX2P30519 316 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 ART1P52961 327 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 CDH15P55291 814 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 MTPNP58546 118 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 RPL38P63173 70 aaKnown RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 MAD2L1Q13257 205 aaPredicted RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 SNTB1Q13884 538 aaKnown RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 OR1C1Q15619 314 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 NSDHLQ15738 373 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 GGTA1PQ4G0N0 100 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 AP1ARQ63HQ0 302 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 GLYATQ6IB77 296 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 FBXO42Q6P3S6 717 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 XKRXQ6PP77 449 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 TBPL2Q6SJ96 375 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 UNC5DQ6UXZ4 953 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 MILR1Q7Z6M3 343 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 IFNEQ86WN2 208 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 RAB11FIP5Q9BXF6 653 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 YTHDF1Q9BYJ9 559 aaKnown RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 UCK2Q9BZX2 261 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 VN1R1Q9GZP7 353 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 RHBGQ9H310 441 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 IKZF5Q9H5V7 419 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 SYNPO2LQ9H987 977 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 ALKBH4Q9NXW9 302 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 SLC25A37Q9NYZ2 338 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 COQ3Q9NZJ6 369 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 OPTCQ9UBM4 332 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 NSD1Q96L73 2696 aaPredicted RBP4.47□□□□□ -1.69
LINC00550-201ENST00000629293 GABRR3A8MPY1 467 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 PRRG2O14669 202 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 CLOCKO15516 846 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 P2RX6O15547 441 aa4.47□□□□□ -1.69
LINC00550-201ENST00000629293 RDH16O75452 317 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms