RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 RGS11O94810 467 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 INHAP05111 366 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 STAT5AP42229 794 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 KLF9Q13886 244 aaPredicted RBP13.18□□□□□ -0.3
LDB3-209ENST00000623056 SLC22A10Q63ZE4 541 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 SUN3Q8TAQ9 357 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 HAVCR2Q8TDQ0 301 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 AHCYL2Q96HN2 611 aaKnown RBP13.18□□□□□ -0.3
LDB3-209ENST00000623056 CAMK1GQ96NX5 476 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 SARGQ9BW04 601 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 PINK1Q9BXM7 581 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 LRRN3Q9H3W5 708 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 TRIM36Q9NQ86 728 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 LSM7Q9UK45 103 aaKnown RBP13.18□□□□□ -0.3
LDB3-209ENST00000623056 SPATA2Q9UM82 520 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 SESN1Q9Y6P5 492 aa13.18□□□□□ -0.3
LDB3-209ENST00000623056 ZC3H12DA2A288 527 aaKnown RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 PEX14O75381 377 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 MTRF1O75570 445 aaKnown RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 ALDOBP05062 364 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 CXCL2P19875 107 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 FPR3P25089 353 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 PITPNAQ00169 270 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 GNA13Q14344 377 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 GRIN2CQ14957 1233 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 ZNF658BQ4V348 819 aaPredicted RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 PRAMEF14Q5SWL7 426 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 MPP7Q5T2T1 576 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 PRAMEF13Q5VWM6 474 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 RGS7BPQ6MZT1 257 aaPredicted RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 TFAP2EQ6VUC0 442 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 Q6ZTK2 550 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 CXXC5Q7LFL8 322 aaKnown RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 OVCH2Q7RTZ1 564 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 FAM129CQ86XR2 697 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 CMTM8Q8IZV2 173 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 KRT78Q8N1N4 520 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 LSM14AQ8ND56 463 aaKnown RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 THAP4Q8WY91 577 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 DIO2Q92813 273 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 SGTBQ96EQ0 304 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 ELMOD3Q96FG2 381 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 IL17FQ96PD4 163 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 ZNF334Q9HCZ1 680 aaPredicted RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 BRD7Q9NPI1 651 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 ACSS1Q9NUB1 689 aaPredicted RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 ZCCHC3Q9NUD5 404 aaKnown RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 TEX10Q9NXF1 929 aaPredicted RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 EMC3Q9P0I2 261 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 FLVCR2Q9UPI3 526 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 GPR55Q9Y2T6 319 aaPredicted RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 BACE2Q9Y5Z0 518 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 MTCL1Q9Y4B5 1905 aaKnown RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 A0A0B4J203 849 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 SLC22A23A1A5C7 686 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 TMPRSS11DO60235 418 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 TFP02787 698 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 KELP23276 732 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 PTGER1P34995 402 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 AHRP35869 848 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 KHKP50053 298 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 PRKAG1P54619 331 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 E2F1Q01094 437 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 SLC3A1Q07837 685 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 PLBD1Q6P4A8 553 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 ZNF620Q6ZNG0 422 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 ESPNLQ6ZVH7 1005 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 NKAIN4Q8IVV8 208 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 OR4D9Q8NGE8 314 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 OR10Z1Q8NGY1 313 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 MOSPD2Q8NHP6 518 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 ABHD4Q8TB40 342 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 ZNF689Q96CS4 500 aaPredicted RBP13.17□□□□□ -0.3
LDB3-209ENST00000623056 LMLNQ96KR4 655 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 GSDMCQ9BYG8 508 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 GLIPR2Q9H4G4 154 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 LHX9Q9NQ69 397 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 CFAP97Q9P2B7 532 aa13.17□□□□□ -0.3
LDB3-209ENST00000623056 NUPL2O15504 423 aaKnown RBP13.16□□□□□ -0.3
LDB3-209ENST00000623056 NDUFA2O43678 99 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 ALPPL2P10696 532 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 SNRPBP14678 240 aaKnown RBP13.16□□□□□ -0.3
LDB3-209ENST00000623056 POU3F2P20265 443 aaPredicted RBP13.16□□□□□ -0.3
LDB3-209ENST00000623056 C4BPBP20851 252 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 PAICSP22234 425 aaKnown RBP13.16□□□□□ -0.3
LDB3-209ENST00000623056 HOXD10P28358 340 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 TRHRP34981 398 aaPredicted RBP13.16□□□□□ -0.3
LDB3-209ENST00000623056 ST3GAL3Q11203 375 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 DYRK1AQ13627 763 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 ZNF697Q5TEC3 545 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 FAM198BQ6UWH4 519 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 PRSS45Q7RTY3 260 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 PXKQ7Z7A4 578 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 SLITRK4Q8IW52 837 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 OR2T33Q8NG76 320 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 ZNF461Q8TAF7 563 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 MS4A8Q9BY19 250 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 MED20Q9H944 212 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 MED9Q9NWA0 146 aa13.16□□□□□ -0.3
LDB3-209ENST00000623056 PLAGL1Q9UM63 463 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms