RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 RCN3Q96D15 328 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 LRRC37BQ96QE4 947 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 CPPED1Q9BRF8 314 aaPredicted RBP16.94■□□□□ 0.3
CIRBP-245ENST00000621399 IKZF5Q9H5V7 419 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 LDAHQ9H6V9 325 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 HHATLQ9HCP6 504 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 GID8Q9NWU2 228 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 DTNAQ9Y4J8 743 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 HRH3Q9Y5N1 445 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 ASH1LQ9NR48 2969 aaKnown RBP16.94■□□□□ 0.3
CIRBP-245ENST00000621399 EXPH5Q8NEV8 1989 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 A0A1W2PQD3 144 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 NPIPB9F8W1W9 429 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 J3QKU1 62 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 KIAA0513O60268 411 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 TNFRSF21O75509 655 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 NPPAP01160 153 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 CHRM4P08173 479 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 GPX2P18283 190 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 GNLYP22749 145 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 RNF144AP50876 292 aaPredicted RBP16.93■□□□□ 0.3
CIRBP-245ENST00000621399 MTPNP58546 118 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 HSF1Q00613 529 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 CHRNEQ04844 493 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 MRPL49Q13405 166 aaKnown RBP16.93■□□□□ 0.3
CIRBP-245ENST00000621399 GNA13Q14344 377 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 GCNT6Q5T4J0 391 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 FRRS1Q6ZNA5 592 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 LRRC74BQ6ZQY2 392 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 MISPQ8IVT2 679 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 ZNF619Q8N2I2 560 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 ANKS4BQ8N8V4 417 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 CCDC197Q8NCU1 140 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 SLC38A5Q8WUX1 472 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 LRRC58Q96CX6 371 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 CMTM5Q96DZ9 223 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 TRIM8Q9BZR9 551 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 SAP130Q9H0E3 1048 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 UBQLN3Q9H347 655 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 DSN1Q9H410 356 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 MED11Q9P086 117 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 FBXL2Q9UKC9 423 aa16.93■□□□□ 0.3
CIRBP-245ENST00000621399 AIM2O14862 343 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 UGT2B17O75795 530 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 HPNP05981 417 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 BCHEP06276 602 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 BMP2P12643 396 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 CRISP3P54108 245 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 RBPJQ06330 500 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 CD226Q15762 336 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 ZNF141Q15928 474 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 PDZK1Q5T2W1 519 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 AP1ARQ63HQ0 302 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 MTERF4Q7Z6M4 381 aaKnown RBP16.92■□□□□ 0.3
CIRBP-245ENST00000621399 OR2M3Q8NG83 312 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 PHOSPHO1Q8TCT1 267 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 MAL2Q969L2 176 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 DTNBP1Q96EV8 351 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 TMEM19Q96HH6 336 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 SH3GL1Q99961 368 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 SLC39A3Q9BRY0 314 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 SLC38A1Q9H2H9 487 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 EXO5Q9H790 373 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 MTHFD2LQ9H903 347 aaPredicted RBP16.92■□□□□ 0.3
CIRBP-245ENST00000621399 ACKR4Q9NPB9 350 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 A4GALTQ9NPC4 353 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 CALML5Q9NZT1 146 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 KCNE5Q9UJ90 142 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 LIPGQ9Y5X9 500 aa16.92■□□□□ 0.3
CIRBP-245ENST00000621399 TRGV5A0A0B4J1U4 118 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 A0A1B0GTH9 108 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 SERINC4A6NH21 518 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 C5orf58C9J3I9 102 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 GTPBP1O00178 669 aaKnown RBP16.91■□□□□ 0.3
CIRBP-245ENST00000621399 NDUFAB1O14561 156 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 GMFGO60234 142 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 IGHG3P01860 377 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 UQCRFS1P47985 274 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 SELPLGQ14242 412 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 MAPK11Q15759 364 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 NANOGP8Q6NSW7 305 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 ARHGAP11AQ6P4F7 1023 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 TRILQ7L0X0 811 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 HMGN2P46Q86SG4 172 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 C10orf111Q8N326 155 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 FADS6Q8N9I5 356 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 PMM1Q92871 262 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 ZG16BQ96DA0 208 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 SH3YL1Q96HL8 342 aaPredicted RBP16.91■□□□□ 0.3
CIRBP-245ENST00000621399 QRSL1Q9H0R6 528 aaKnown RBP16.91■□□□□ 0.3
CIRBP-245ENST00000621399 RUBCNLQ9H714 662 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 PTGES2Q9H7Z7 377 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 NANOGQ9H9S0 305 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 EFCAB1Q9HAE3 211 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 PLSCR2Q9NRY7 297 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 DKKL1Q9UK85 242 aa16.91■□□□□ 0.3
CIRBP-245ENST00000621399 EML6Q6ZMW3 1958 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 IGLV3-32A0A0A0MS00 114 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 CENPVL1A0A0U1RR11 272 aa16.9■□□□□ 0.3
CIRBP-245ENST00000621399 B4DXG7 233 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms