RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 KLHL26Q53HC5 615 aa12.46□□□□□ -0.41
NEK3-210ENST00000620675 VRK2Q86Y07 508 aa12.46□□□□□ -0.41
NEK3-210ENST00000620675 ZNF619Q8N2I2 560 aa12.46□□□□□ -0.41
NEK3-210ENST00000620675 WDSUB1Q8N9V3 476 aa12.46□□□□□ -0.41
NEK3-210ENST00000620675 TEX19Q8NA77 164 aa12.46□□□□□ -0.41
NEK3-210ENST00000620675 PNPLA2Q96AD5 504 aa12.46□□□□□ -0.41
NEK3-210ENST00000620675 TMCO6Q96DC7 493 aa12.46□□□□□ -0.41
NEK3-210ENST00000620675 JSRP1Q96MG2 331 aaPredicted RBP12.46□□□□□ -0.41
NEK3-210ENST00000620675 UBL7Q96S82 380 aaPredicted RBP12.46□□□□□ -0.41
NEK3-210ENST00000620675 TSPAN10Q9H1Z9 355 aaPredicted RBP12.46□□□□□ -0.41
NEK3-210ENST00000620675 SPAG4Q9NPE6 437 aa12.46□□□□□ -0.41
NEK3-210ENST00000620675 MRTO4Q9UKD2 239 aaKnown RBP12.46□□□□□ -0.41
NEK3-210ENST00000620675 L3MBTL1Q9Y468 752 aa12.46□□□□□ -0.41
NEK3-210ENST00000620675 PCNX1Q96RV3 2341 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 GNB5O14775 395 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 HS6ST1O60243 411 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 OPN1SWP03999 348 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 CNR1P21554 472 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 MAGEA8P43361 318 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 CRISP3P54108 245 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 KCNJ2P63252 427 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 HPCAP84074 193 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 VMACQ2NL98 169 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 CBLN3Q6UW01 205 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 DND1Q8IYX4 353 aaKnown RBP12.46□□□□□ -0.42
NEK3-210ENST00000620675 OR2T12Q8NG77 320 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 ZNF524Q96C55 264 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 WBP1Q96G27 269 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 REXO5Q96IC2 774 aaKnown RBP12.46□□□□□ -0.42
NEK3-210ENST00000620675 GNRHR2Q96P88 292 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 SH3GL1Q99961 368 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 OSBPL11Q9BXB4 747 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 ALG2Q9H553 416 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 UBQLN4Q9NRR5 601 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 RLIMQ9NVW2 624 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 CNIH4Q9P003 139 aa12.46□□□□□ -0.42
NEK3-210ENST00000620675 ALG1L2C9J202 215 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 TRIM3O75382 744 aaPredicted RBP12.45□□□□□ -0.42
NEK3-210ENST00000620675 ANGPTL1O95841 491 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 NCK1P16333 377 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 PCBP3P57721 371 aaKnown RBP12.45□□□□□ -0.42
NEK3-210ENST00000620675 PSPHP78330 225 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 ZNF141Q15928 474 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 GLIPR1L2Q4G1C9 344 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 AP1ARQ63HQ0 302 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 REEP3Q6NUK4 255 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 C11orf65Q8NCR3 313 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 DUSP19Q8WTR2 217 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 SH3YL1Q96HL8 342 aaPredicted RBP12.45□□□□□ -0.42
NEK3-210ENST00000620675 FRMD6Q96NE9 622 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 SECISBP2Q96T21 854 aaKnown RBP12.45□□□□□ -0.42
NEK3-210ENST00000620675 TBL1XR1Q9BZK7 514 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 CD300AQ9UGN4 299 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 EGFL7Q9UHF1 273 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 FBXL2Q9UKC9 423 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 KLF13Q9Y2Y9 288 aaPredicted RBP12.45□□□□□ -0.42
NEK3-210ENST00000620675 WIF1Q9Y5W5 379 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 FLNCQ14315 2725 aa12.45□□□□□ -0.42
NEK3-210ENST00000620675 C15orf38-AP3S2A0A0A6YYH1 394 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 ANKRD33BA6NCL7 494 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 AGAP5A6NIR3 686 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 FAM166BA8MTA8 275 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 FAM220BPB1ANY3 271 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 C5orf58C9J3I9 102 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 ZNHIT1O43257 154 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 TPST1O60507 370 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 ADAM11O75078 769 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 PDE5AO76074 875 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 SOX30O94993 753 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 WISP1O95388 367 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 CELA3AP09093 270 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 RPS4Y1P22090 263 aaKnown RBP12.44□□□□□ -0.42
NEK3-210ENST00000620675 PCGF2P35227 344 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 MNAT1P51948 309 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 TXNL4AP83876 142 aaKnown RBP12.44□□□□□ -0.42
NEK3-210ENST00000620675 DMTNQ08495 405 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 ZNF630Q2M218 657 aaPredicted RBP12.44□□□□□ -0.42
NEK3-210ENST00000620675 ARPINQ7Z6K5 226 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 MICU2Q8IYU8 434 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 CISD2Q8N5K1 135 aaKnown RBP12.44□□□□□ -0.42
NEK3-210ENST00000620675 TMEM178AQ8NBL3 297 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 OR10Q1Q8NGQ4 319 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 WFDC6Q9BQY6 131 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 BCL2L10Q9HD36 194 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 MED11Q9P086 117 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.44□□□□□ -0.42
NEK3-210ENST00000620675 POLEQ07864 2286 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 SCDO00767 359 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 DNAJA2O60884 412 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 EPPINO95925 133 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 TCEA1P23193 301 aaKnown RBP12.44□□□□□ -0.42
NEK3-210ENST00000620675 MLLT10P55197 1068 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 FOXK1P85037 733 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 KLRB1Q12918 225 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 TMEM81Q6P7N7 255 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 C16orf89Q6UX73 402 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 ZNF836Q6ZNA1 936 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 CLIP4Q8N3C7 705 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 SMYD1Q8NB12 490 aa12.44□□□□□ -0.42
NEK3-210ENST00000620675 ZFP62Q8NB50 900 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms