RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	CRB3	Q9BUF7	120 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	ERVK-6	Q9BXR3	956 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLC35C2	Q9NQQ7	365 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	TMEM181	Q9P2C4	612 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	IKZF3	Q9UKT9	509 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	RUVBL2	Q9Y230	463 aa	Known RBP	4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	CRYL1	Q9Y2S2	319 aa		4.94	□□□□□ -1.62
CBWD3-215	ENST00000619322	TRIM64	A6NGJ6	449 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	NDUFS8	O00217	210 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	TSPAN4	O14817	238 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	PLOD3	O60568	738 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	TSPAN2	O60636	221 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	TPPP	O94811	219 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	KLHL18	O94889	574 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	WDPCP	O95876	746 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF708	P17019	499 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	COX5A	P20674	150 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	GPX3	P22352	226 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	CBL	P22681	906 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	CTSS	P25774	331 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	PDHA2	P29803	388 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	SSR4	P51571	173 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	CHN2	P52757	468 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	PNLIPRP2	P54317	469 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	MLLT10	P55197	1068 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	B3GALT5-AS1	P59052	145 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	NEDD8	Q15843	81 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	ACSF3	Q4G176	576 aa	Predicted RBP	4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	COQ5	Q5HYK3	327 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	KRT74	Q7RTS7	529 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	OR51Q1	Q8NH59	317 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	CMTM7	Q96FZ5	175 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	PLEKHA8	Q96JA3	519 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	LPAR4	Q99677	370 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	AP5S1	Q9NUS5	200 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	C6orf203	Q9P0P8	240 aa	Predicted RBP	4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	PTGFRN	Q9P2B2	879 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	CD84	Q9UIB8	345 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	PKD1L2	Q7Z442	2459 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	TCRBV3S1	A0A5B6	114 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	TRPC5OS	A6NMA1	111 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	VWC2L	B2RUY7	222 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	TMEM233	B4DJY2	109 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322		E9PBE3	544 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	PSMD12	O00232	456 aa	Predicted RBP	4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	ASNA1	O43681	348 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	AGFG2	O95081	481 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	CRYZL1	O95825	349 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	FCER2	P06734	321 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	HEXB	P07686	556 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	RPS17	P08708	135 aa	Known RBP	4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	MYF5	P13349	255 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	CDH2	P19022	906 aa	Predicted RBP	4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	EPOR	P19235	508 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	HTR1E	P28566	365 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	EPHA3	P29320	983 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	GRK3	P35626	688 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZNF133	P52736	654 aa	Predicted RBP	4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	NAGLU	P54802	743 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	TBPL1	P62380	186 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	DPY19L1	Q2PZI1	675 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	ANKRD46	Q86W74	232 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	VRK3	Q8IV63	474 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLC22A9	Q8IVM8	553 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	FUNDC1	Q8IVP5	155 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	LILRA2	Q8N149	483 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	METTL4	Q8N3J2	472 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	LILRB1	Q8NHL6	650 aa	Predicted RBP	4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	SLCO4A1	Q96BD0	722 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	ASB9	Q96DX5	294 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	THOC3	Q96J01	351 aa	Known RBP	4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	RILP	Q96NA2	401 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	TMEM79	Q9BSE2	394 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	PLSCR4	Q9NRQ2	329 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	ADPRHL2	Q9NX46	363 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	PTTG2	Q9NZH5	202 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	ASB4	Q9Y574	426 aa		4.93	□□□□□ -1.62
CBWD3-215	ENST00000619322	SH3PXD2B	A1X283	911 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322		H7C417	338 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	RBP1	P09455	135 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	ALDOC	P09972	364 aa	Known RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	BMX	P51813	675 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	PKNOX1	P55347	436 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	MS4A2	Q01362	244 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	TRAP1	Q12931	704 aa	Known RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	SQLE	Q14534	574 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	OR4D1	Q15615	310 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	OR1C1	Q15619	314 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	AMZ1	Q400G9	498 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	C16orf89	Q6UX73	402 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	C17orf64	Q86WR6	236 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	MCEMP1	Q8IX19	187 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	DEFB107A	Q8IZN7	70 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	OR6K3	Q8NGY3	331 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	ZBTB8A	Q96BR9	441 aa		4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	EFHD2	Q96C19	240 aa	Predicted RBP	4.92	□□□□□ -1.62
CBWD3-215	ENST00000619322	OR4K3	Q96R72	315 aa		4.92	□□□□□ -1.62

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