RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 ANKRD19PQ9H560 264 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 VAPAQ9P0L0 249 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 EPHA6Q9UF33 1036 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 PDE10AQ9Y233 779 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 PEX16Q9Y5Y5 336 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 U3KQ87 197 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 A0A1B0GTL3 188 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 NRP2O60462 931 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 PLIN3O60664 434 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 ZFPL1O95159 310 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 C9P02748 559 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 MPOP05164 745 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 IDSP22304 550 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 SLC1A6P48664 564 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 RIPPLY1Q0D2K3 151 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 GPR176Q14439 515 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 CHI3L2Q15782 390 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 ZXDCQ2QGD7 858 aaPredicted RBP11.3□□□□□ -0.6
SRRT-216ENST00000618262 AMZ1Q400G9 498 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 NKAIN2Q5VXU1 208 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 TIGD3Q6B0B8 471 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 SBSNQ6UWP8 590 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 GPSM1Q86YR5 675 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 LRRC17Q8N6Y2 441 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 PTGR2Q8N8N7 351 aaPredicted RBP11.3□□□□□ -0.6
SRRT-216ENST00000618262 ZNF548Q8NEK5 533 aaPredicted RBP11.3□□□□□ -0.6
SRRT-216ENST00000618262 KBTBD8Q8NFY9 601 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 TFAP2CQ92754 450 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 MARS2Q96GW9 593 aaKnown RBP11.3□□□□□ -0.6
SRRT-216ENST00000618262 TCEAL7Q9BRU2 100 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 SEMA4BQ9NPR2 832 aaPredicted RBP11.3□□□□□ -0.6
SRRT-216ENST00000618262 SERINC1Q9NRX5 453 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 SNTG1Q9NSN8 517 aa11.3□□□□□ -0.6
SRRT-216ENST00000618262 ASCC3Q8N3C0 2202 aaKnown RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 SLC5A10A0PJK1 596 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 DNASE2O00115 360 aaPredicted RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 DLX3O60479 287 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 CYTIPO60759 359 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 RLN2P04090 185 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 ATP6V1B2P21281 511 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 RPS5P46782 204 aaKnown RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 PKNOX1P55347 436 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 CLDN6P56747 220 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 PPP1CAP62136 330 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 YPEL5P62699 121 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 METRNLQ641Q3 311 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 KLHL24Q6TFL4 600 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 REC114Q7Z4M0 266 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 S100A7AQ86SG5 101 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 TRIM48Q8IWZ4 208 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 C1orf52Q8N6N3 182 aaKnown RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 FAM83FQ8NEG4 500 aaPredicted RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 FBXO17Q96EF6 278 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 PPP3R2Q96LZ3 170 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 ZDHHC5Q9C0B5 715 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 MYOZ1Q9NP98 299 aaPredicted RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 ZNF225Q9UK10 706 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 PACSIN3Q9UKS6 424 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 GOLT1BQ9Y3E0 138 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 LOC400499M0QZD8 3231 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 CPED1A4D0V7 1026 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 BTBD17A6NE02 478 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 ATXN7O15265 892 aaPredicted RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 GLRA3O75311 464 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 SUPT7LO94864 414 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 VAMP5O95183 116 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 CSF2P04141 144 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 ACSM4P0C7M7 580 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 GAAP10253 952 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 MUC1P15941 1255 aaPredicted RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 ENGP17813 658 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 GPR4P46093 362 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 HLCSP50747 726 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 KIAA1024LP59773 190 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 FGL1Q08830 312 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 MRPL49Q13405 166 aaKnown RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 TRAM1Q15629 374 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 OVCH2Q7RTZ1 564 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 CLEC14AQ86T13 490 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 TMEM151AQ8N4L1 468 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 EID2Q8N6I1 236 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 OR7A2PQ8NGA2 310 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 OR2L8Q8NGY9 312 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.29□□□□□ -0.6
SRRT-216ENST00000618262 SLC37A2Q8TED4 501 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 GAL3ST4Q96RP7 486 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 ELF4Q99607 663 aaPredicted RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 ZNF559Q9BR84 538 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 C1QTNF3Q9BXJ4 246 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 BEX2Q9BXY8 128 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 YTHDF1Q9BYJ9 559 aaKnown RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 C20orf27Q9GZN8 174 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 MFFQ9GZY8 342 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 OR52A5Q9H2C5 316 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 ANKHQ9HCJ1 492 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 MYEF2Q9P2K5 600 aaKnown RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 NUFIP1Q9UHK0 495 aaKnown RBP11.29□□□□□ -0.6
SRRT-216ENST00000618262 TP53TG5Q9Y2B4 290 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 ZFHX4Q86UP3 3567 aa11.29□□□□□ -0.6
SRRT-216ENST00000618262 RP1P56715 2156 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms