RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 FAAHO00519 579 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 CD72P21854 359 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 CD6P30203 668 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 PBX2P40425 430 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 SLC5A9Q2M3M2 681 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 PAQR3Q6TCH7 311 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 XYLT1Q86Y38 959 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 OR52P1PQ8NH57 321 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 FOLH1BQ9HBA9 442 aa11.97□□□□□ -0.49
TCF4-248ENST00000616053 CD8B2A6NJW9 211 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 PIRO00625 290 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 SPINT2O43291 252 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 SLC6A8P48029 635 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 KCNQ1P51787 676 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 ZNF684Q5T5D7 378 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 MMP21Q8N119 569 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 ZNF583Q96ND8 569 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 M0R233 179 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 GABRDO14764 452 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 SCRG1O75711 98 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 CD9P21926 228 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 TNFSF8P32971 234 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 EGFL6Q8IUX8 553 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 SUSD3Q96L08 255 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 GMLQ99445 158 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 RNF32Q9H0A6 362 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 GAREM1Q9H706 876 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 USP36Q9P275 1121 aaKnown RBP11.96□□□□□ -0.49
TCF4-248ENST00000616053 CMAHPQ9Y471 501 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 CILPO75339 1184 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 MAOBP27338 520 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 OR1E3Q8WZA6 343 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 SLC2A13Q96QE2 648 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 PINK1Q9BXM7 581 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 TINAGL1Q9GZM7 467 aaPredicted RBP11.96□□□□□ -0.49
TCF4-248ENST00000616053 ZNF785A8K8V0 405 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 AMY2AP04746 511 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 HLA-DOBP13765 273 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 HOXA11P31270 313 aaPredicted RBP11.96□□□□□ -0.49
TCF4-248ENST00000616053 PCGF2P35227 344 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 CORO7P57737 925 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 OPCMLQ14982 345 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 SLAMF9Q96A28 289 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 FUCA2Q9BTY2 467 aa11.96□□□□□ -0.49
TCF4-248ENST00000616053 ZNF436Q9C0F3 470 aaPredicted RBP11.96□□□□□ -0.49
TCF4-248ENST00000616053 NUP153P49790 1475 aaKnown RBP11.96□□□□□ -0.5
TCF4-248ENST00000616053 OR51F1A6NGY5 319 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 PLSCR1O15162 318 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 ITGB2P05107 769 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 GCNT2Q8N0V5 402 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 ZNF775Q96BV0 537 aaPredicted RBP11.96□□□□□ -0.5
TCF4-248ENST00000616053 MSANTD3Q96H12 275 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 PRRC1Q96M27 445 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 P2RY12Q9H244 342 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 LIPT1Q9Y234 373 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 ZNF587BE7ETH6 402 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 PER1O15534 1290 aaPredicted RBP11.96□□□□□ -0.5
TCF4-248ENST00000616053 DDAH2O95865 285 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 CD44P16070 742 aaKnown RBP11.96□□□□□ -0.5
TCF4-248ENST00000616053 ARHGAP8P85298 464 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 HNF4GQ14541 408 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 C6orf89Q6UWU4 347 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 FBXL14Q8N1E6 418 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 CISD2Q8N5K1 135 aaKnown RBP11.96□□□□□ -0.5
TCF4-248ENST00000616053 BRIX1Q8TDN6 353 aaKnown RBP11.96□□□□□ -0.5
TCF4-248ENST00000616053 TMEM230Q96A57 120 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 ZNF419Q96HQ0 510 aaPredicted RBP11.96□□□□□ -0.5
TCF4-248ENST00000616053 RSRP1Q9BUV0 290 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 ALOXE3Q9BYJ1 711 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 NARFLQ9H6Q4 476 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 ATRNL1Q5VV63 1379 aa11.96□□□□□ -0.5
TCF4-248ENST00000616053 YKT6O15498 198 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 GRPP07492 148 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 NOVA1P51513 510 aaKnown RBP11.95□□□□□ -0.5
TCF4-248ENST00000616053 ATP6AP1Q15904 470 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ITPKCQ96DU7 683 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 REEP6Q96HR9 211 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ZNF641Q96N77 438 aaPredicted RBP11.95□□□□□ -0.5
TCF4-248ENST00000616053 METTL9Q9H1A3 318 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 MINDY3Q9H8M7 445 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 B4GALT6Q9UBX8 382 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 B3GNT3Q9Y2A9 372 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 FAHP16930 419 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 LMO2P25791 158 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 SYT13Q7L8C5 426 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 C11orf40Q8WZ69 217 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 A0A0D9SG52 128 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ANKRD66B4E2M5 251 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 ONECUT2O95948 504 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 UBCP0CG48 685 aaKnown RBP11.95□□□□□ -0.5
TCF4-248ENST00000616053 CD38P28907 300 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 INHBCP55103 352 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 BAXQ07812 192 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 TMEM119Q4V9L6 283 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 TRNP1Q6NT89 227 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 FAM71AQ8IYT1 594 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 GJC3Q8NFK1 279 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 OCSTAMPQ9BR26 566 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 BTBD2Q9BX70 525 aa11.95□□□□□ -0.5
TCF4-248ENST00000616053 MAB21L2Q9Y586 359 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms