RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 RNF145Q96MT1 663 aa20.86■□□□□ 0.93
MMP28-203ENST00000612672 TMEM237Q96Q45 408 aa20.86■□□□□ 0.93
MMP28-203ENST00000612672 TBL1XR1Q9BZK7 514 aa20.86■□□□□ 0.93
MMP28-203ENST00000612672 Q9N2J8 555 aa20.86■□□□□ 0.93
MMP28-203ENST00000612672 MCTS1Q9ULC4 181 aaKnown RBP20.86■□□□□ 0.93
MMP28-203ENST00000612672 KRT6AP02538 564 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 KRT6BP04259 564 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 DDCP20711 480 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 KRT6CP48668 564 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 SLC7A5Q01650 507 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 C17orf67Q0P5P2 114 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 RASA2Q15283 850 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 PLPPR5Q32ZL2 321 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 SPIN4Q56A73 249 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 ZNF678Q5SXM1 525 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 TFAP2EQ6VUC0 442 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 CEP112Q8N8E3 955 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.85■□□□□ 0.93
MMP28-203ENST00000612672 ABHD3Q8WU67 409 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 TMEM158Q8WZ71 300 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 GTPBP3Q969Y2 492 aaKnown RBP20.85■□□□□ 0.93
MMP28-203ENST00000612672 TRMT61AQ96FX7 289 aaKnown RBP20.85■□□□□ 0.93
MMP28-203ENST00000612672 ZNF382Q96SR6 550 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 PYCARDQ9ULZ3 195 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 TIMM22Q9Y584 194 aa20.85■□□□□ 0.93
MMP28-203ENST00000612672 A0A1W2PRB8 838 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 ANXA4P09525 319 aaPredicted RBP20.84■□□□□ 0.93
MMP28-203ENST00000612672 GABRA3P34903 492 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 C2orf80Q0P641 193 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 FAM71E1Q6IPT2 247 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 WDR75Q8IWA0 830 aaKnown RBP20.84■□□□□ 0.93
MMP28-203ENST00000612672 METTL6Q8TCB7 284 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 ELP4Q96EB1 424 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 AMDHD1Q96NU7 426 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 PAFAH2Q99487 392 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 TACO1Q9BSH4 297 aaKnown RBP20.84■□□□□ 0.93
MMP28-203ENST00000612672 TRAF4Q9BUZ4 470 aaPredicted RBP20.84■□□□□ 0.93
MMP28-203ENST00000612672 FUT8Q9BYC5 575 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 SRXN1Q9BYN0 137 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 RAB17Q9H0T7 212 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 MED17Q9NVC6 651 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 DDX18Q9NVP1 670 aaKnown RBP20.84■□□□□ 0.93
MMP28-203ENST00000612672 FBXO34Q9NWN3 711 aa20.84■□□□□ 0.93
MMP28-203ENST00000612672 IGHV4-30-2A0A087WSY4 118 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 DPRXA6NFQ7 191 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 ULK1O75385 1050 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 OXSR1O95747 527 aaPredicted RBP20.83■□□□□ 0.93
MMP28-203ENST00000612672 IFNA2P01563 188 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 TUBBP07437 444 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 CD3EP07766 207 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 PTNP21246 168 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 MAP3K8P41279 467 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 BSPH1Q075Z2 132 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 GPRIN3Q6ZVF9 776 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 STEAP2Q8NFT2 490 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 OR4C3Q8NH37 302 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 TRIM2Q9C040 744 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 EQTNQ9NQ60 294 aa20.83■□□□□ 0.93
MMP28-203ENST00000612672 A0A1W2PP18 115 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 A8MV72 311 aaPredicted RBP20.82■□□□□ 0.92
MMP28-203ENST00000612672 TRIM49D1C9J1S8 452 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 ALG1L2C9J202 215 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 DLX3O60479 287 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 RAMP1O60894 148 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 SUPT7LO94864 414 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 SYNGR4O95473 234 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 COL6A2P12110 1019 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 HMOX2P30519 316 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 CLK3P49761 638 aaKnown RBP20.82■□□□□ 0.92
MMP28-203ENST00000612672 FOXA1P55317 472 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 RAC1P63000 192 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 SLC18A2Q05940 514 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 ZNF763Q0D2J5 394 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 ZNF239Q16600 458 aaKnown RBP20.82■□□□□ 0.92
MMP28-203ENST00000612672 KRTAP24-1Q3LI83 254 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 CHRFAM7AQ494W8 412 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 C6orf52Q5T4I8 152 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 HBMQ6B0K9 141 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 STK32CQ86UX6 486 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 FBXO30Q8TB52 745 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 RNF128Q8TEB7 428 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 DCAKDQ8WVC6 231 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 GLRX2Q9NS18 164 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 SIRT5Q9NXA8 310 aa20.82■□□□□ 0.92
MMP28-203ENST00000612672 MALRD1Q5VYJ5 2156 aa20.81■□□□□ 0.92
MMP28-203ENST00000612672 C7orf72A4D263 438 aa20.81■□□□□ 0.92
MMP28-203ENST00000612672 EFNA2O43921 213 aa20.81■□□□□ 0.92
MMP28-203ENST00000612672 INHBAP08476 426 aa20.81■□□□□ 0.92
MMP28-203ENST00000612672 EDNRAP25101 427 aa20.81■□□□□ 0.92
MMP28-203ENST00000612672 TEX35Q5T0J7 233 aa20.81■□□□□ 0.92
MMP28-203ENST00000612672 SFRP5Q5T4F7 317 aa20.81■□□□□ 0.92
MMP28-203ENST00000612672 ESPNLQ6ZVH7 1005 aa20.81■□□□□ 0.92
MMP28-203ENST00000612672 ZNF551Q7Z340 670 aaPredicted RBP20.81■□□□□ 0.92
MMP28-203ENST00000612672 TUSC5Q8IXB3 177 aa20.81■□□□□ 0.92
MMP28-203ENST00000612672 HOXB13Q92826 284 aaPredicted RBP20.81■□□□□ 0.92
MMP28-203ENST00000612672 OSTF1Q92882 214 aa20.81■□□□□ 0.92
MMP28-203ENST00000612672 SH3YL1Q96HL8 342 aaPredicted RBP20.81■□□□□ 0.92
MMP28-203ENST00000612672 CDC42EP4Q9H3Q1 356 aaKnown RBP20.81■□□□□ 0.92
MMP28-203ENST00000612672 TMEM216Q9P0N5 145 aa20.81■□□□□ 0.92
MMP28-203ENST00000612672 POLR3HQ9Y535 204 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms