RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PAMR1Q6UXH9 720 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 PAQR7Q86WK9 346 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 PEX5LQ8IYB4 626 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 SHISA5Q8N114 240 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 OR52N1Q8NH53 320 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 GAL3ST3Q96A11 431 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 TBX5Q99593 518 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 APOOQ9BUR5 198 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 DPH1Q9BZG8 443 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 ENKD1Q9H0I2 346 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 RMI1Q9H9A7 625 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 TMEM74BQ9NUR3 256 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 NOX1Q9Y5S8 564 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 GSAPA4D1B5 854 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 CPN2P22792 545 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 ZNF136P52737 540 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 ID2Q02363 134 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 ACSM1Q08AH1 577 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 DEFB134Q4QY38 66 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 PLET1Q6UQ28 207 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 WDR88Q6ZMY6 472 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 PRR23CQ6ZRP0 262 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 TMEM246Q9BRR3 403 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 RWDD3Q9Y3V2 267 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 TRBV23OR9-2A0A075B6M9 112 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 HCN1O60741 890 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 HLA-DQB1P01920 261 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 GKN3PP0CG01 181 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 AK4P27144 223 aaPredicted RBP18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 FXYD6P3P58550 94 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 TNFRSF17Q02223 184 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 MAPK14Q16539 360 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 NR2C2APQ86WQ0 139 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 ARSGQ96EG1 525 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 COQ7Q99807 217 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 GDF15Q99988 308 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 OR52D1Q9H346 318 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 KIR3DX1Q9H7L2 352 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 SIRT4Q9Y6E7 314 aaPredicted RBP18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 CLCA3PQ9Y6N3 262 aa18.83■□□□□ 0.61
SHKBP1-225ENST00000600733 TTC36A6NLP5 189 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 C12orf71A8MTZ7 269 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 J3QRE1 110 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 HRO43593 1189 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 CTBP2P56545 445 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 TATDN3Q17R31 274 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 TRMT12Q53H54 448 aaKnown RBP18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 ASPGQ86U10 573 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 NOXA1Q86UR1 476 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 LILRB4Q8NHJ6 448 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 PFN4Q8NHR9 129 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 PRSS27Q9BQR3 290 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 HCAR1Q9BXC0 346 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 C20orf141Q9NUB4 165 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 KCMF1Q9P0J7 381 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 COLEC10Q9Y6Z7 277 aa18.83■□□□□ 0.6
SHKBP1-225ENST00000600733 P2RX6O15547 441 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 APODP05090 189 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 HMGN1P05114 100 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 HTR2AP28223 471 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 MLLT3P42568 568 aaPredicted RBP18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 EEF1A1P68104 462 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 RGS1Q08116 209 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 ENPP2Q13822 863 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 ARHGAP11BQ3KRB8 267 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 OR2L13Q8N349 312 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 SDF2Q99470 211 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 ATP13A2Q9NQ11 1180 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 RBFOX1Q9NWB1 397 aaKnown RBP18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 NTMQ9P121 344 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 NLKQ9UBE8 527 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 POLHQ9Y253 713 aa18.82■□□□□ 0.6
SHKBP1-225ENST00000600733 TBC1D3KA0A087X1G2 549 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 TBC1D3FA6NER0 549 aaPredicted RBP18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 MAKP20794 623 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 TBC1D3GQ6DHY5 549 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 TMEM99Q8N816 258 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 OR4K14Q8NGD5 310 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 FANK1Q8TC84 345 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 TIMP4Q99727 224 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 CERS4Q9HA82 394 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 CACYBPQ9HB71 228 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 FBXO34Q9NWN3 711 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 ASB6Q9NWX5 421 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 GDE1Q9NZC3 331 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 OR6C2Q9NZP2 312 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 PTGFRNQ9P2B2 879 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 NPIPA5A0A0B4J1W7 369 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 PRSS38A1L453 326 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 POM121BA6NF01 834 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 ZNF860A6NHJ4 632 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 NPIPA7E9PJI5 369 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 GTPBP1O00178 669 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 RNF13O43567 381 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 NPIPA8P0DM63 369 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 PAICSP22234 425 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 RPS15AP62244 130 aaKnown RBP18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 RUNX2Q13950 521 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 Q5BKY6 102 aa18.81■□□□□ 0.6
SHKBP1-225ENST00000600733 ZNF776Q68DI1 518 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms