RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SLC16A11Q8NCK7 471 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 ADAMTS15Q8TE58 950 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 AKAP1Q92667 903 aaKnown RBP eCLIP15.39■□□□□ 0.05
LIG1-206ENST00000594067 NACC2Q96BF6 587 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 HYLS1Q96M11 299 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 ZNF681Q96N22 645 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 FCRL4Q96PJ5 515 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 WACQ9BTA9 647 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 RNF32Q9H0A6 362 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 ISG20L2Q9H9L3 353 aaKnown RBP15.39■□□□□ 0.05
LIG1-206ENST00000594067 HINT3Q9NQE9 182 aaKnown RBP15.39■□□□□ 0.05
LIG1-206ENST00000594067 H2AFY2Q9P0M6 372 aaPredicted RBP15.39■□□□□ 0.05
LIG1-206ENST00000594067 ZNF780BQ9Y6R6 833 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 CDH23Q9H251 3354 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 CDC42EP2O14613 210 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 NARSO43776 548 aaKnown RBP15.39■□□□□ 0.05
LIG1-206ENST00000594067 GAAP10253 952 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 IFI30P13284 250 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 UQCRC1P31930 480 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 SLC38A6Q8IZM9 456 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 C9orf62Q8N4C0 152 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 SIRT6Q8N6T7 355 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 OR51G2Q8NGK0 314 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 NR4A3Q92570 626 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 CDS1Q92903 461 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 TEX12Q9BXU0 123 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 ACTRT3Q9BYD9 372 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 DIABLOQ9NR28 239 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 CALML5Q9NZT1 146 aa15.39■□□□□ 0.05
LIG1-206ENST00000594067 EXOGQ9Y2C4 368 aaKnown RBP15.39■□□□□ 0.05
LIG1-206ENST00000594067 A0A1W2PP55 124 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 ZC3H12DA2A288 527 aaKnown RBP15.38■□□□□ 0.05
LIG1-206ENST00000594067 MEN1O00255 615 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 CHST10O43529 356 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 PRICKLE3O43900 615 aaPredicted RBP15.38■□□□□ 0.05
LIG1-206ENST00000594067 ASGR2P07307 311 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 HTR1FP30939 366 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 PRKAR1BP31321 381 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 INPP1P49441 399 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 SNRPNP63162 240 aaKnown RBP15.38■□□□□ 0.05
LIG1-206ENST00000594067 EOGTQ5NDL2 527 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 ZNF57Q68EA5 555 aaPredicted RBP15.38■□□□□ 0.05
LIG1-206ENST00000594067 KCT2Q8NC54 265 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 MAP6Q96JE9 813 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 DHRS9Q9BPW9 319 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 C11orf49Q9H6J7 331 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 SLC28A3Q9HAS3 691 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 THAP10Q9P2Z0 257 aaPredicted RBP15.38■□□□□ 0.05
LIG1-206ENST00000594067 TNFRSF10DQ9UBN6 386 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 SLC7A7Q9UM01 511 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 FUT1P19526 365 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 AHRP35869 848 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 RNF144AP50876 292 aaPredicted RBP15.38■□□□□ 0.05
LIG1-206ENST00000594067 MRPL28Q13084 256 aaKnown RBP15.38■□□□□ 0.05
LIG1-206ENST00000594067 MZT2AQ6P582 158 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 ZNF322Q6U7Q0 402 aaPredicted RBP15.38■□□□□ 0.05
LIG1-206ENST00000594067 FRRS1Q6ZNA5 592 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 TMEM91Q6ZNR0 172 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 MBOAT2Q6ZWT7 520 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 HDDC3Q8N4P3 179 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 OR2T33Q8NG76 320 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 OR7G2Q8NG99 324 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 DOK4Q8TEW6 326 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 DNAJA4Q8WW22 397 aaPredicted RBP15.38■□□□□ 0.05
LIG1-206ENST00000594067 CREB3L1Q96BA8 519 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 ASB16Q96NS5 453 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 TBX5Q99593 518 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 COQ7Q99807 217 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 ANKRD19PQ9H560 264 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 SYNDIG1Q9H7V2 258 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 MED20Q9H944 212 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 PHPT1Q9NRX4 125 aaPredicted RBP15.38■□□□□ 0.05
LIG1-206ENST00000594067 B3GNT2Q9NY97 397 aa15.38■□□□□ 0.05
LIG1-206ENST00000594067 ZFR2Q9UPR6 939 aaKnown RBP15.38■□□□□ 0.05
LIG1-206ENST00000594067 CENPVL1A0A0U1RR11 272 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 KLF4O43474 513 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 HRO43593 1189 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 IGHA1P01876 353 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 POU3F3P20264 500 aaPredicted RBP15.37■□□□□ 0.05
LIG1-206ENST00000594067 GCGRP47871 477 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 SOX9P48436 509 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 FZD5Q13467 585 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 PUS10Q3MIT2 529 aaKnown RBP15.37■□□□□ 0.05
LIG1-206ENST00000594067 RAB11FIP5Q9BXF6 653 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 ZNF443Q9Y2A4 671 aaPredicted RBP15.37■□□□□ 0.05
LIG1-206ENST00000594067 FABP7O15540 132 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 NDUFV2P19404 249 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 ELK1P19419 428 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 SLC6A1P30531 599 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 STXBP1P61764 594 aaKnown RBP15.37■□□□□ 0.05
LIG1-206ENST00000594067 GPR176Q14439 515 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 CST6Q15828 149 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 FAM205BPQ63HN1 556 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 PLBD1Q6P4A8 553 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 CXXC5Q7LFL8 322 aaKnown RBP15.37■□□□□ 0.05
LIG1-206ENST00000594067 NRROSQ86YC3 692 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 OR4N5Q8IXE1 308 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 DTX3Q8N9I9 347 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 OR52N1Q8NH53 320 aa15.37■□□□□ 0.05
LIG1-206ENST00000594067 PTGFRNQ9P2B2 879 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms