RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SMU1Q2TAY7 513 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 BICRALQ6AI39 1079 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 CLEC9AQ6UXN8 241 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 SPATC1Q76KD6 591 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 LUZP2Q86TE4 346 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 YRDCQ86U90 279 aaKnown RBP8.57□□□□□ -1.04
BRCA1-226ENST00000591534 IFNEQ86WN2 208 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 SAMD14Q8IZD0 417 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-226ENST00000591534 TMEM151AQ8N4L1 468 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 OR6Y1Q8NGX8 325 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 WDR20Q8TBZ3 569 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 PHF21BQ96EK2 531 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 LRRC37BQ96QE4 947 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 PIP5K1AQ99755 562 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 SLC39A3Q9BRY0 314 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 NTMT1Q9BV86 223 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 ZNF717Q9BY31 904 aaPredicted RBP8.57□□□□□ -1.04
BRCA1-226ENST00000591534 KRTAP4-6Q9BYQ5 205 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 BRINP2Q9C0B6 783 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 ELOVL6Q9H5J4 265 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 NOL11Q9H8H0 719 aaKnown RBP8.57□□□□□ -1.04
BRCA1-226ENST00000591534 FGFR1OP2Q9NVK5 253 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 TAS2R10Q9NYW0 307 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 PACSIN3Q9UKS6 424 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 RNF11Q9Y3C5 154 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 EML6Q6ZMW3 1958 aa8.57□□□□□ -1.04
BRCA1-226ENST00000591534 PRRC2AP48634 2157 aaKnown RBP8.56□□□□□ -1.04
BRCA1-226ENST00000591534 PRAMEF25A6NGN4 478 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 WASHC1A8K0Z3 465 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 OR7A17O14581 309 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 SMPD2O60906 423 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 ERAL1O75616 437 aaKnown RBP8.56□□□□□ -1.04
BRCA1-226ENST00000591534 GBAP04062 536 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 HRGP04196 525 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 RPS17P08708 135 aaKnown RBP8.56□□□□□ -1.04
BRCA1-226ENST00000591534 HSD3B1P14060 373 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 DRD5P21918 477 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 GPX3P22352 226 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 HSD3B2P26439 372 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 SRD5A2P31213 254 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 PPICP45877 212 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 TRA2BP62995 288 aaKnown RBP8.56□□□□□ -1.04
BRCA1-226ENST00000591534 SRYQ05066 204 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 CDK5R2Q13319 367 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 EFR3AQ14156 821 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 GGTA1PQ4G0N0 100 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 ARL13AQ5H913 290 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-226ENST00000591534 FNDC7Q5VTL7 733 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 SLC48A1Q6P1K1 146 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 GPRIN3Q6ZVF9 776 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 P4HA3Q7Z4N8 544 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 YTHDF3Q7Z739 585 aaKnown RBP8.56□□□□□ -1.04
BRCA1-226ENST00000591534 PIGWQ7Z7B1 504 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 PLCZ1Q86YW0 608 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 GRAMD2AQ8IUY3 354 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 PRR22Q8IZ63 422 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 LRRC75A-AS1Q8N1F1 130 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 C9orf106Q8NAJ2 232 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 WFDC11Q8NEX6 87 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 ADCY4Q8NFM4 1077 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 OR52B6Q8NGF0 335 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 CEP70Q8NHQ1 597 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 UTP4Q969X6 686 aaKnown RBP8.56□□□□□ -1.04
BRCA1-226ENST00000591534 INTS12Q96CB8 462 aaKnown RBP8.56□□□□□ -1.04
BRCA1-226ENST00000591534 ERP27Q96DN0 273 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 OMA1Q96E52 524 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 COL21A1Q96P44 957 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 TUBA1CQ9BQE3 449 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 CCDC28BQ9BUN5 200 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 BDH2Q9BUT1 245 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 GATA5Q9BWX5 397 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-226ENST00000591534 OR2B2Q9GZK3 357 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 NXF5Q9H1B4 397 aaKnown RBP8.56□□□□□ -1.04
BRCA1-226ENST00000591534 ZBTB26Q9HCK0 441 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 GALNT8Q9NY28 637 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 TRPS1Q9UHF7 1281 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 DKKL1Q9UK85 242 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 DLGAP4Q9Y2H0 992 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 MRPS18CQ9Y3D5 142 aaKnown RBP8.56□□□□□ -1.04
BRCA1-226ENST00000591534 PCDHA9Q9Y5H5 950 aa8.56□□□□□ -1.04
BRCA1-226ENST00000591534 FRG2CA6NGY1 282 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 OR6C70A6NIJ9 312 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 SLC28A1O00337 649 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 MSTNO14793 375 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 AZIN1O14977 448 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 TO15178 435 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 RGS14O43566 566 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 ULK1O75385 1050 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 REM1O75628 298 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 SLITRK5O94991 958 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 HEXAP06865 529 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 CT62P0C5K7 136 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 TSPAN8P19075 237 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 CD53P19397 219 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 DRD4P21917 467 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 IL12BP29460 328 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 HMOX2P30519 316 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 CPOXP36551 454 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 GYS2P54840 703 aa8.55□□□□□ -1.04
BRCA1-226ENST00000591534 MAPRE2Q15555 327 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms