RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 DUSP19Q8WTR2 217 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 HOXB13Q92826 284 aaPredicted RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 EFHD2Q96C19 240 aaPredicted RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 WFIKKN1Q96NZ8 548 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 BBS4Q96RK4 519 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 PIP5K1AQ99755 562 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 LMF2Q9BU23 707 aaKnown RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 RTN4RQ9BZR6 473 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 DSN1Q9H410 356 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 GSX1Q9H4S2 264 aaPredicted RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 RNF122Q9H9V4 155 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 TMBIM4Q9HC24 238 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 MYNNQ9NPC7 610 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 ARGLU1Q9NWB6 273 aaPredicted RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 FAM120CQ9NX05 1096 aaKnown RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 ELOVL5Q9NYP7 299 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 PPP4R1LQ9P1A2 415 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 DKKL1Q9UK85 242 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 MRTO4Q9UKD2 239 aaKnown RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 ZNF337Q9Y3M9 751 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 TESMINQ9Y4I5 508 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 CCL27Q9Y4X3 112 aa9.38□□□□□ -0.91
VPS4B-207ENST00000591519 POLR3HQ9Y535 204 aaPredicted RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 FLNAP21333 2647 aaKnown RBP9.38□□□□□ -0.91
VPS4B-207ENST00000591519 TMEM120BA0PK00 339 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 SLC22A20A6NK97 555 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 C17orf51A8MQB3 221 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 TM9SF1O15321 606 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 EMC8O43402 210 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 ITM2AO43736 263 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 SKAP2O75563 359 aaPredicted RBP9.37□□□□□ -0.91
VPS4B-207ENST00000591519 HSPA4LO95757 839 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 IL33O95760 270 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 JUNP05412 331 aaKnown RBP9.37□□□□□ -0.91
VPS4B-207ENST00000591519 CD8BP10966 210 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 BGNP21810 368 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 PRPH2P23942 346 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 ARRB2P32121 409 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 CD79BP40259 229 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 NCBP2P52298 156 aaKnown RBP eCLIP9.37□□□□□ -0.91
VPS4B-207ENST00000591519 SUCLG1P53597 346 aaKnown RBP9.37□□□□□ -0.91
VPS4B-207ENST00000591519 PRR5P85299 388 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 C17orf67Q0P5P2 114 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 FGFBP1Q14512 234 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 GUSBP1Q15486 140 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 DECR1Q16698 335 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 OXLD1Q5BKU9 147 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 TNFAIP8L3Q5GJ75 292 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 NOXRED1Q6NXP6 359 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 IKBIPQ70UQ0 350 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 P4HA3Q7Z4N8 544 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 BTLAQ7Z6A9 289 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 BIVMQ86UB2 503 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 ARL8AQ96BM9 186 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 C1GALT1C1Q96EU7 318 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 C18orf12Q96KH6 178 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 PPP1R36Q96LQ0 422 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 AMDHD1Q96NU7 426 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 SLC39A3Q9BRY0 314 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 GLIPR2Q9H4G4 154 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 PTGES2Q9H7Z7 377 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 EML4Q9HC35 981 aaKnown RBP9.37□□□□□ -0.91
VPS4B-207ENST00000591519 Q9N2J8 555 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 SSU72Q9NP77 194 aaKnown RBP9.37□□□□□ -0.91
VPS4B-207ENST00000591519 MIEF1Q9NQG6 463 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 MED11Q9P086 117 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 GIMAP2Q9UG22 337 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 EIF3LQ9Y262 564 aaKnown RBP9.37□□□□□ -0.91
VPS4B-207ENST00000591519 ZNF175Q9Y473 711 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 TRAF6Q9Y4K3 522 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 AP4B1Q9Y6B7 739 aa9.37□□□□□ -0.91
VPS4B-207ENST00000591519 OR2M5A3KFT3 312 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 DEFB108AA8MXU0 73 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 PIP5K1BO14986 540 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 SCO2O43819 266 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 SEC22BO75396 215 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 RSL1D1O76021 490 aaKnown RBP9.36□□□□□ -0.91
VPS4B-207ENST00000591519 CHEK2O96017 543 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 HK1P19367 917 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 IL11P20809 199 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 CRYGSP22914 178 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 CLK3P49761 638 aaKnown RBP9.36□□□□□ -0.91
VPS4B-207ENST00000591519 PSMD4P55036 377 aaKnown RBP9.36□□□□□ -0.91
VPS4B-207ENST00000591519 NKX6-1P78426 367 aaPredicted RBP9.36□□□□□ -0.91
VPS4B-207ENST00000591519 POU4F3Q15319 338 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 ZNHIT3Q15649 155 aaPredicted RBP9.36□□□□□ -0.91
VPS4B-207ENST00000591519 GALNTL6Q49A17 601 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 KANK2Q63ZY3 851 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 VWA1Q6PCB0 445 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 PRSS57Q6UWY2 283 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 TMEM107Q6UX40 140 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 HDXQ7Z353 690 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 LRRC75A-AS1Q8N1F1 130 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 METTL25Q8N6Q8 603 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 OR2T11Q8NH01 316 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 TWIST2Q8WVJ9 160 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 FIG4Q92562 907 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 ZNF764Q96H86 408 aaPredicted RBP9.36□□□□□ -0.91
VPS4B-207ENST00000591519 MARK4Q96L34 752 aa9.36□□□□□ -0.91
VPS4B-207ENST00000591519 PIGQQ9BRB3 760 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms