RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 OR5M10Q6IEU7 315 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 NET1Q7Z628 596 aaPredicted RBP17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 ZNF614Q8N883 585 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 FBXO27Q8NI29 283 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 ZG16BQ96DA0 208 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 TREX2Q9BQ50 279 aaPredicted RBP17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 TSPAN10Q9H1Z9 355 aaPredicted RBP17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 PIF1Q9H611 641 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 TMEM38AQ9H6F2 299 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 CALML5Q9NZT1 146 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 DSPPQ9NZW4 1301 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 PCNX3Q9H6A9 2034 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 FREM3P0C091 2139 aa17.32■□□□□ 0.36
CLPTM1-209ENST00000588855 C15orf38-AP3S2A0A0A6YYH1 394 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 A0A1W2PQD3 144 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 CRYABP02511 175 aaKnown RBP17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 ESRRAP11474 423 aaPredicted RBP17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 PPIAP62937 165 aaKnown RBP17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 CDK6Q00534 326 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 ALDH6A1Q02252 535 aaKnown RBP17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 SCARB2Q14108 478 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 CD226Q15762 336 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 ZNF141Q15928 474 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 KLHL26Q53HC5 615 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 AP1ARQ63HQ0 302 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 TIGD3Q6B0B8 471 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 ARPINQ7Z6K5 226 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 SERPINA11Q86U17 422 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 ZZZ3Q8IYH5 903 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 WDSUB1Q8N9V3 476 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 ZNF527Q8NB42 609 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 CPT1CQ8TCG5 803 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 NSL1Q96IY1 281 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 GNRHR2Q96P88 292 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 HOPXQ9BPY8 73 aaPredicted RBP17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 ECSITQ9BQ95 431 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 ZNF703Q9H7S9 590 aaPredicted RBP17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 CMTM6Q9NX76 183 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 PPP4R1LQ9P1A2 415 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 USP22Q9UPT9 525 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 SVILO95425 2214 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 C5orf58C9J3I9 102 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 ACOT7O00154 380 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 TFECO14948 347 aaPredicted RBP17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 NDUFB5O43674 189 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 MST1P26927 711 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 SLC7A2P52569 658 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 PSME3P61289 254 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 GNA13Q14344 377 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 ZNF630Q2M218 657 aaPredicted RBP17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 HYAL4Q2M3T9 481 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 ZNF324BQ6AW86 544 aaPredicted RBP17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 PRICKLE2Q7Z3G6 844 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 CALHM3Q86XJ0 350 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 SLC15A3Q8IY34 581 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 TMEM251Q8N6I4 163 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 OR1J4Q8NGS1 313 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 DUSP19Q8WTR2 217 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 FAR1Q8WVX9 515 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 NR4A3Q92570 626 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 OLAHQ9NV23 265 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 DTNAQ9Y4J8 743 aa17.31■□□□□ 0.36
CLPTM1-209ENST00000588855 CCT8L1PA6NM43 557 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 NME4O00746 187 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 WISP2O76076 250 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 PGM3O95394 542 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 T-ENOLP0DO92 83 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 ELAVL4P26378 380 aaKnown RBP17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 MAGEA5P43359 124 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 REEP3Q6NUK4 255 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 SLC22A16Q86VW1 577 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 PLCZ1Q86YW0 608 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 SIAH3Q8IW03 269 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 METTL25Q8N6Q8 603 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 C11orf65Q8NCR3 313 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 BBS10Q8TAM1 723 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 PHOSPHO1Q8TCT1 267 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 ZNF583Q96ND8 569 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 BARD1Q99728 777 aaKnown RBP17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 BCL2L10Q9HD36 194 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 SDHAF3Q9NRP4 125 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 GMPR2Q9P2T1 348 aaKnown RBP17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 FBXL2Q9UKC9 423 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 C15orf41Q9Y2V0 281 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 L3MBTL1Q9Y468 752 aa17.3■□□□□ 0.36
CLPTM1-209ENST00000588855 A0A0G2JPF8 293 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 SERINC4A6NH21 518 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 AGAP5A6NIR3 686 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 HNRNPCL2B2RXH8 293 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 HNRNPCL3B7ZW38 293 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 NPIPA5E9PKD4 350 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 OIP5O43482 229 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 HNRNPCL1O60812 293 aaKnown RBP17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 UBOX5O94941 541 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 CELA3AP09093 270 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 HNRNPCL4P0DMR1 293 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 RPS4Y1P22090 263 aaKnown RBP17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 CALB2P22676 271 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 GDF1P27539 372 aa17.29■□□□□ 0.36
CLPTM1-209ENST00000588855 MXRA7P84157 204 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms