RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 ADAMDEC1O15204 470 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 NDUFB5O43674 189 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 ADAP00813 363 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 JUNP05412 331 aaKnown RBP13.58□□□□□ -0.24
IFT20-216ENST00000588477 RPS17P08708 135 aaKnown RBP13.58□□□□□ -0.24
IFT20-216ENST00000588477 CHN1P15882 459 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 SERPINB8P50452 374 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 PSMD4P55036 377 aaKnown RBP13.58□□□□□ -0.24
IFT20-216ENST00000588477 PLTPP55058 493 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 CASP9P55211 416 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 C21orf58P58505 322 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 PRR5P85299 388 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 GRAMD1BQ3KR37 738 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 TMEM201Q5SNT2 666 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 PDSS1Q5T2R2 415 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 TMEM107Q6UX40 140 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 TFAP2EQ6VUC0 442 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.58□□□□□ -0.24
IFT20-216ENST00000588477 DTX2Q86UW9 622 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 TUSC5Q8IXB3 177 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 OR10H5Q8NGA6 315 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 OSTF1Q92882 214 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 GRIP2Q9C0E4 1043 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 SHARPINQ9H0F6 387 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 FAIMQ9NVQ4 179 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 LPAR3Q9UBY5 353 aa13.58□□□□□ -0.24
IFT20-216ENST00000588477 C19orf53Q9UNZ5 99 aaPredicted RBP13.58□□□□□ -0.24
IFT20-216ENST00000588477 SVEP1Q4LDE5 3571 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 FAM187AA6NFU0 413 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 MYO1GB0I1T2 1018 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 UPK1AO00322 258 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 HSD3B1P14060 373 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 HSD3B2P26439 372 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 NCBP2P52298 156 aaKnown RBP eCLIP13.57□□□□□ -0.245e-8■■■□□ 15.2
IFT20-216ENST00000588477 VLDLRP98155 873 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 LOXL1Q08397 574 aaPredicted RBP13.57□□□□□ -0.24
IFT20-216ENST00000588477 ZNHIT3Q15649 155 aaPredicted RBP13.57□□□□□ -0.24
IFT20-216ENST00000588477 PRSS53Q2L4Q9 553 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 CPTPQ5TA50 214 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 CLEC2AQ6UVW9 174 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 SEZ6L2Q6UXD5 910 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 EXOC3L1Q86VI1 746 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 GTPBP8Q8N3Z3 284 aaPredicted RBP13.57□□□□□ -0.24
IFT20-216ENST00000588477 ARIH2OSQ8N7S6 290 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 CDYL2Q8N8U2 506 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 BANPQ8N9N5 519 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 ZNF483Q8TF39 744 aaPredicted RBP13.57□□□□□ -0.24
IFT20-216ENST00000588477 ABHD3Q8WU67 409 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 KISS1RQ969F8 398 aaPredicted RBP13.57□□□□□ -0.24
IFT20-216ENST00000588477 APIPQ96GX9 242 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 REXO5Q96IC2 774 aaKnown RBP13.57□□□□□ -0.24
IFT20-216ENST00000588477 ADAD1Q96M93 576 aaKnown RBP13.57□□□□□ -0.24
IFT20-216ENST00000588477 RNF145Q96MT1 663 aa13.57□□□□□ -0.24
IFT20-216ENST00000588477 A0A087WZY1 265 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 GXYLT2A0PJZ3 443 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 SHISA9B4DS77 424 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 MANBAO00462 879 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 RAD51CO43502 376 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 IGKV1D-16P01601 117 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 ME2P23368 584 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 PSMA4P25789 261 aaKnown RBP13.56□□□□□ -0.24
IFT20-216ENST00000588477 CARD18P57730 90 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 IRX1P78414 480 aaPredicted RBP13.56□□□□□ -0.24
IFT20-216ENST00000588477 ITGADQ13349 1161 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 AGAP6Q5VW22 663 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 CYB5R2Q6BCY4 276 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 GATSQ8NAP1 163 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 FBXO25Q8TCJ0 367 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 RNF128Q8TEB7 428 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 PIK3R3Q92569 461 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 HTRA1Q92743 480 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 ZBTB8AQ96BR9 441 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 LMF2Q9BU23 707 aaKnown RBP13.56□□□□□ -0.24
IFT20-216ENST00000588477 CACNG6Q9BXT2 260 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 EBPLQ9BY08 206 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 POTEKPQ9BYX7 375 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 DDX18Q9NVP1 670 aaKnown RBP13.56□□□□□ -0.24
IFT20-216ENST00000588477 PLCE1Q9P212 2302 aa13.56□□□□□ -0.24
IFT20-216ENST00000588477 A0A1W2PRB8 838 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 ELOA3DA6NLF2 546 aaPredicted RBP13.55□□□□□ -0.24
IFT20-216ENST00000588477 UBFD1O14562 309 aaKnown RBP13.55□□□□□ -0.24
IFT20-216ENST00000588477 DLX3O60479 287 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 KCNH1O95259 989 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 PSMG1O95456 288 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 KRT6AP02538 564 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 KRT6BP04259 564 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 PABPC4LP0CB38 370 aaKnown RBP13.55□□□□□ -0.24
IFT20-216ENST00000588477 PYGBP11216 843 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 ZNF16P17020 682 aaPredicted RBP13.55□□□□□ -0.24
IFT20-216ENST00000588477 TIA1P31483 386 aaKnown RBP eCLIP13.55□□□□□ -0.24
IFT20-216ENST00000588477 GABRA3P34903 492 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 SFTPDP35247 375 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 THBS2P35442 1172 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 HSD17B3P37058 310 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 KRT6CP48668 564 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 ZNF41P51814 821 aaPredicted RBP13.55□□□□□ -0.24
IFT20-216ENST00000588477 CDH11P55287 796 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 DSCR9P59020 149 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 BTKQ06187 659 aa13.55□□□□□ -0.24
IFT20-216ENST00000588477 ACSM2AQ08AH3 577 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms