RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 GZMKP49863 264 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 STXBP1P61764 594 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ADAM15Q13444 863 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CAMK2BQ13554 666 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 LRRC32Q14392 662 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 COL19A1Q14993 1142 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ZNF425Q6IV72 752 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FAM111BQ6SJ93 734 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CXXC5Q7LFL8 322 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 NR2C2APQ86WQ0 139 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OR7G2Q8NG99 324 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OR51G2Q8NGK0 314 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ASB16Q96NS5 453 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 UBL7Q96S82 380 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 KCNN2Q9H2S1 579 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 LYARQ9NX58 379 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CXXC1Q9P0U4 656 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SLC7A7Q9UM01 511 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FAM183AA6NL82 134 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 RNF13O43567 381 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 RGS9O75916 674 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CEACAM5P06731 702 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PRKCAP17252 672 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ELK1P19419 428 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MTNR1BP49286 362 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 GALK2Q01415 458 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CDC73Q6P1J9 531 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 GID4Q8IVV7 300 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ACBD7Q8N6N7 88 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CDS1Q92903 461 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 C10orf90Q96M02 699 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MS4A4EQ96PG1 132 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TIMP4Q99727 224 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TRAF4Q9BUZ4 470 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 NIPAL2Q9H841 368 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 RPRD1BQ9NQG5 326 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 BABAM2Q9NXR7 383 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SERGEFQ9UGK8 458 aa13.23□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ORC5O43913 435 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 RNGTTO60942 597 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 AGR2O95994 175 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 C1QBP02746 253 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ZGLP1P0C6A0 271 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CMPK1P30085 196 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 INPP1P49441 399 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 BTN3A2P78410 334 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TNK1Q13470 666 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PDGFRLQ15198 375 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CST6Q15828 149 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SMARCD3Q6STE5 483 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 B3GLCTQ6Y288 498 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ZNF836Q6ZNA1 936 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 BRIX1Q8TDN6 353 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FCRL4Q96PJ5 515 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 RSPH9Q9H1X1 276 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 KRCC1Q9NPI7 259 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PTGFRNQ9P2B2 879 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ZFR2Q9UPR6 939 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 WDR45Q9Y484 360 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SIRT4Q9Y6E7 314 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TBC1D3KA0A087X1G2 549 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 LOC102723532A0A0G2JNH3 316 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TBC1D3FA6NER0 549 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 C12orf71A8MTZ7 269 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ISM1B1AKI9 464 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ARSBP15848 533 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PAICSP22234 425 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ZNF136P52737 540 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TBC1D3GQ6DHY5 549 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 NIPAL3Q6P499 406 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PLBD1Q6P4A8 553 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SYCE2Q6PIF2 218 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 KCT2Q8NC54 265 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 JPH3Q8WXH2 748 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SMARCD2Q92925 531 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TRIM63Q969Q1 353 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PRSS27Q9BQR3 290 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 C1QTNF2Q9BXJ5 285 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 OR52D1Q9H346 318 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SLC17A4Q9Y2C5 497 aa13.22□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FXYD6P3P58550 94 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 RRAS2P62070 204 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 CSTF1Q05048 431 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 RPE65Q16518 533 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ARHGAP11BQ3KRB8 267 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 TJAP1Q5JTD0 557 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 IDNKQ5T6J7 187 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 HBMQ6B0K9 141 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 MEPCEQ7L2J0 689 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 SPRED2Q7Z698 418 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 BPHLQ86WA6 291 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PLCZ1Q86YW0 608 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 LRRC25Q8N386 305 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 C12orf76Q8N812 135 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 WACQ9BTA9 647 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ALG8Q9BVK2 526 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 FN3KQ9H479 309 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 ING3Q9NXR8 418 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 EXTL2Q9UBQ6 330 aa13.21□□□□□ -0.29
CDK5RAP3-237ENST00000585163 PHF11Q9UIL8 331 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms