RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 SDR39U1Q9NRG7 319 aaPredicted RBP11.45□□□□□ -0.58
SMARCE1-218ENST00000582955 FAM215AQ9Y5M1 114 aa11.45□□□□□ -0.58
SMARCE1-218ENST00000582955 UTP20O75691 2785 aaKnown RBP11.45□□□□□ -0.58
SMARCE1-218ENST00000582955 GSNP06396 782 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 HOXD4P09016 255 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 HK1P19367 917 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 AGAP20933 346 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 PTGER4P35408 488 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 DCTP40126 519 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 CDKN2CP42773 168 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 KHKP50053 298 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 RNF144AP50876 292 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 POLR2JP52435 117 aaKnown RBP11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 ART3Q13508 389 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 GANABQ14697 944 aaKnown RBP11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 TIGD2Q4W5G0 525 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 ATAD3BQ5T9A4 648 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 RAET1LQ5VY80 246 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 SAXO2Q658L1 398 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 RTL6Q6ICC9 239 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 TNFAIP8L2Q6P589 184 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 ENPP6Q6UWR7 440 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 DNAJC14Q6Y2X3 702 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 C16orf62Q7Z3J2 963 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 ARFGAP2Q8N6H7 521 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 ZNF614Q8N883 585 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 ZNF527Q8NB42 609 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 GOT1L1Q8NHS2 421 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 CA5BP1Q8WTZ4 195 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 XAGE5Q8WWM1 108 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 NEURL3Q96EH8 262 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 WDYHV1Q96HA8 205 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 TTYH2Q9BSA4 534 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 PRDM14Q9GZV8 571 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 HHATLQ9HCP6 504 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 EXD2Q9NVH0 621 aa11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 MRPS18CQ9Y3D5 142 aaKnown RBP11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 NCOA6Q14686 2063 aaPredicted RBP11.44□□□□□ -0.58
SMARCE1-218ENST00000582955 SETXQ7Z333 2677 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 PCNX1Q96RV3 2341 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 FAM234BA2RU67 622 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 AHRRA9YTQ3 701 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 H0Y3Z8 333 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 RFXANKO14593 260 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 ZIC3O60481 467 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 EDF1O60869 148 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 CLDN14O95500 239 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 ANP32DO95626 131 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 AGR2O95994 175 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 AK1P00568 194 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 OR12D1P0DN82 309 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 GLI4P10075 376 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 HTR1EP28566 365 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 STARP49675 285 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 GFRA1P56159 465 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 SRYQ05066 204 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 SF3B4Q15427 424 aaKnown RBP eCLIP11.43□□□□□ -0.585e-11■■□□□ 13.3
SMARCE1-218ENST00000582955 CDSNQ15517 529 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 GPR68Q15743 365 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 ACSF3Q4G176 576 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 RNF130Q86XS8 419 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 CCDC71Q8IV32 467 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 MISPQ8IVT2 679 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 PNPT1Q8TCS8 783 aaKnown RBP11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 PHOSPHO1Q8TCT1 267 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 MIPOL1Q8TD10 442 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 ASB5Q8WWX0 329 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 RAB8BQ92930 207 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 VPS33AQ96AX1 596 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 C1GALT1C1Q96EU7 318 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 SH3YL1Q96HL8 342 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 TRIB1Q96RU8 372 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 SDF2Q99470 211 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 HOXD1Q9GZZ0 328 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 RMND5AQ9H871 391 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 NPHS2Q9NP85 383 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 DCTN4Q9UJW0 460 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 RNF6Q9Y252 685 aa11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 KLF2Q9Y5W3 355 aaPredicted RBP11.43□□□□□ -0.58
SMARCE1-218ENST00000582955 IGLV3-32A0A0A0MS00 114 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 A0A1W2PQD3 144 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 FAM90A27PA6NNH2 459 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 FAM47E-STBD1D6RA91 191 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 H3BNH8 94 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 HCRTR2O43614 444 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 STX11O75558 287 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 C1QCP02747 245 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 CHMP24386 653 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 MSX1P28360 303 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 GRNP28799 593 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 CHRNB4P30926 498 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 ZFP36L2P47974 494 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 ANXA11P50995 505 aaKnown RBP11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 ATP12AP54707 1039 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 RCAN2Q14206 197 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 CD226Q15762 336 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 ZNF630Q2M218 657 aaPredicted RBP11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 ARHGAP11BQ3KRB8 267 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 C6orf10Q5SRN2 563 aa11.42□□□□□ -0.58
SMARCE1-218ENST00000582955 MSANTD1Q6ZTZ1 278 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms