RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 CREBBPQ92793 2442 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 IGLV3-32A0A0A0MS00 114 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 NDUFB5O43674 189 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 AGR2O95994 175 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 GSNP06396 782 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 BMP7P18075 431 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 KHKP50053 298 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 ATP4BP51164 291 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 IRX1P78414 480 aaPredicted RBP20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 GANABQ14697 944 aaKnown RBP20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 TMEM211Q6ICI0 200 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 TNFAIP8L2Q6P589 184 aaPredicted RBP20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 MRGPRGQ86SM5 289 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 IFNEQ86WN2 208 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 MARVELD2Q8N4S9 558 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 CHDHQ8NE62 594 aaPredicted RBP20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 ABTB1Q969K4 478 aaPredicted RBP20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 VPS33AQ96AX1 596 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 ITCHQ96J02 903 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 SDF2Q99470 211 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 TIMP4Q99727 224 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 PTGES2Q9H7Z7 377 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 EXD2Q9NVH0 621 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 MED12Q93074 2177 aa20.15■□□□□ 0.82
SMARCD2-206ENST00000577990 PHF3Q92576 2039 aaKnown RBP20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 NPIPA5A0A0B4J1W7 369 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 A0A1W2PQD3 144 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 NPIPA7E9PJI5 369 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 ACTL6AO96019 429 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 NPIPA8P0DM63 369 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 OR12D1P0DN82 309 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 GABRA1P14867 456 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 SQLEQ14534 574 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 FLYWCH1Q4VC44 716 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 ATAD3BQ5T9A4 648 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 DNAJC14Q6Y2X3 702 aaPredicted RBP20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 C16orf62Q7Z3J2 963 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 MISPQ8IVT2 679 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 RPRMLQ8N4K4 120 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 GATSQ8NAP1 163 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 ZNF527Q8NB42 609 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 ALKBH4Q9NXW9 302 aa20.14■□□□□ 0.81
SMARCD2-206ENST00000577990 A0A0G2JND7 137 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 C1QCP02747 245 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 HOXD4P09016 255 aaPredicted RBP20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 TCEA1P23193 301 aaKnown RBP20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 TXNL4AP83876 142 aaKnown RBP20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 GUCY1A3Q02108 690 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 RCAN2Q14206 197 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 ARHGAP11BQ3KRB8 267 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 DCST1Q5T197 706 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 C1orf185Q5T7R7 199 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 HEPHL1Q6MZM0 1159 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 XKRXQ6PP77 449 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 RNF130Q86XS8 419 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 PM20D2Q8IYS1 436 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 ULK2Q8IYT8 1036 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 XAGE5Q8WWM1 108 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 RAB8BQ92930 207 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 C1GALT1C1Q96EU7 318 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 SFXN2Q96NB2 322 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 PRDM14Q9GZV8 571 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 TMEM45AQ9NWC5 275 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 FAM215AQ9Y5M1 114 aa20.13■□□□□ 0.81
SMARCD2-206ENST00000577990 CACNA1CQ13936 2221 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 PCNX3Q9H6A9 2034 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 NPIPB9F8W1W9 429 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 ZIC3O60481 467 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 STX11O75558 287 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 ANP32DO95626 131 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 KRT75O95678 551 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 TROVE2P10155 538 aaKnown RBP eCLIP20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 HK1P19367 917 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 AGAP20933 346 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 PTGER4P35408 488 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 ANXA11P50995 505 aaKnown RBP20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 ATP12AP54707 1039 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 GFRA1P56159 465 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 C6orf10Q5SRN2 563 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 RTL6Q6ICC9 239 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 AAGABQ6PD74 315 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 BLOC1S3Q6QNY0 202 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 B3GNT6Q6ZMB0 384 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 FUNDC1Q8IVP5 155 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 ZNF350Q9GZX5 532 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 CCDC134Q9H6E4 229 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 SLC6A13Q9NSD5 602 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 FGFR1OP2Q9NVK5 253 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 CCDC167Q9P0B6 97 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 TRIM33Q9UPN9 1127 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 CAMK2AQ9UQM7 478 aa20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 RPH3AQ9Y2J0 694 aaPredicted RBP20.12■□□□□ 0.81
SMARCD2-206ENST00000577990 HMGN4O00479 90 aa20.11■□□□□ 0.81
SMARCD2-206ENST00000577990 NR5A2O00482 541 aa20.11■□□□□ 0.81
SMARCD2-206ENST00000577990 GMFGO60234 142 aa20.11■□□□□ 0.81
SMARCD2-206ENST00000577990 VIMP08670 466 aaKnown RBP20.11■□□□□ 0.81
SMARCD2-206ENST00000577990 ZCCHC18P0CG32 403 aa20.11■□□□□ 0.81
SMARCD2-206ENST00000577990 NCF2P19878 526 aaPredicted RBP20.11■□□□□ 0.81
SMARCD2-206ENST00000577990 MSX1P28360 303 aa20.11■□□□□ 0.81
SMARCD2-206ENST00000577990 NUP107P57740 925 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms