RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 A0A0B4J293 547 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 C5orf58C9J3I9 102 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 B3GALT2O43825 422 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 MITFO75030 526 aaPredicted RBP12.88□□□□□ -0.35
RNF43-202ENST00000577625 DNAJB6O75190 326 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 C9P02748 559 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 BCHEP06276 602 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 PROS1P07225 676 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 ALPPL2P10696 532 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 FOSL1P15407 271 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 ZNF250P15622 560 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 CPN2P22792 545 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 GRK5P34947 590 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 MPIP34949 423 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 FEN1P39748 380 aaKnown RBP12.88□□□□□ -0.35
RNF43-202ENST00000577625 LIM2P55344 173 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 VSX2P58304 361 aaPredicted RBP12.88□□□□□ -0.35
RNF43-202ENST00000577625 ANGPT1Q15389 498 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 DEFB110Q30KQ9 67 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 BHLHB9Q6PI77 547 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 GALNT5Q7Z7M9 940 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 CCDC116Q8IYX3 515 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 CSNK1A1LQ8N752 337 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 RNF31Q96EP0 1072 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 TMEM19Q96HH6 336 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 IFT22Q9H7X7 185 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 IL21RQ9HBE5 538 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 PRDM9Q9NQV7 894 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 THSD1Q9NS62 852 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 NDUFAF4Q9P032 175 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 RAB23Q9ULC3 237 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 DAPP1Q9UN19 280 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 DIMT1Q9UNQ2 313 aaKnown RBP12.88□□□□□ -0.35
RNF43-202ENST00000577625 ZNF780BQ9Y6R6 833 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 A0A1W2PQ09 198 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 ZNF860A6NHJ4 632 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 A8MUA0 341 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 PDE9AO76083 593 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 HOXD4P09016 255 aaPredicted RBP12.88□□□□□ -0.35
RNF43-202ENST00000577625 CHMP24386 653 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 HOXA6P31267 233 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 DBPQ10586 325 aaPredicted RBP12.88□□□□□ -0.35
RNF43-202ENST00000577625 BAK1Q16611 211 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 SZRD1Q7Z422 152 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 GEMIN6Q8WXD5 167 aaKnown RBP12.88□□□□□ -0.35
RNF43-202ENST00000577625 RAB8BQ92930 207 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 DCLRE1CQ96SD1 692 aaKnown RBP12.88□□□□□ -0.35
RNF43-202ENST00000577625 SLC38A3Q99624 504 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 EPYCQ99645 322 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 BARD1Q99728 777 aaKnown RBP12.88□□□□□ -0.35
RNF43-202ENST00000577625 KCNS3Q9BQ31 491 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.88□□□□□ -0.35
RNF43-202ENST00000577625 OR51E2Q9H255 320 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 RNF167Q9H6Y7 350 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 SMURF1Q9HCE7 757 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 MS4A12Q9NXJ0 267 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 ELF5Q9UKW6 265 aaPredicted RBP12.88□□□□□ -0.35
RNF43-202ENST00000577625 NDRG4Q9ULP0 352 aaKnown RBP12.88□□□□□ -0.35
RNF43-202ENST00000577625 CSNK1G3Q9Y6M4 447 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 V9GYH0 126 aa12.88□□□□□ -0.35
RNF43-202ENST00000577625 A0A1B0GVT2 93 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 SLC9B1P1A6NJY1 282 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 ADAMDEC1O15204 470 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 B3GALNT1O75752 331 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 FHP07954 510 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 CYP4B1P13584 511 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 FNTBP49356 437 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 OLR1P78380 273 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 ZXDAP98168 799 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 IL1RL1Q01638 556 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 GNA13Q14344 377 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 QPRTQ15274 297 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 GPR19Q15760 415 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 C14orf28Q4W4Y0 310 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 TYW3Q6IPR3 259 aaKnown RBP12.87□□□□□ -0.35
RNF43-202ENST00000577625 GPALPP1Q8IXQ4 340 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 SAMD14Q8IZD0 417 aaPredicted RBP12.87□□□□□ -0.35
RNF43-202ENST00000577625 CYP4Z2PQ8N1L4 340 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 OR56A1Q8NGH5 318 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 MAP3K3Q99759 626 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 CCDC3Q9BQI4 270 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 COPS4Q9BT78 406 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 OR51I1Q9H343 314 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 STARD5Q9NSY2 213 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 P2RX2Q9UBL9 471 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 PCDHGB3Q9Y5G1 929 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 SLC22A7Q9Y694 548 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 CCDC163A0A0D9SF12 145 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 PRAMEF25A6NGN4 478 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 CTSBP07858 339 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 OR12D1P0DN82 309 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 TNFRSF1BP20333 461 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 TLX1P31314 330 aaPredicted RBP12.87□□□□□ -0.35
RNF43-202ENST00000577625 KHKP50053 298 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 ANXA11P50995 505 aaKnown RBP12.87□□□□□ -0.35
RNF43-202ENST00000577625 PRR5P85299 388 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 RPS26P11Q5JNZ5 115 aaPredicted RBP12.87□□□□□ -0.35
RNF43-202ENST00000577625 SLC35F1Q5T1Q4 408 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 KDM4DQ6B0I6 523 aa12.87□□□□□ -0.35
RNF43-202ENST00000577625 CYP4Z1Q86W10 505 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms