RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 EPPINO95925 133 aa21.32■■□□□ 1
SNF8-217ENST00000576353 AK1P00568 194 aa21.32■■□□□ 1
SNF8-217ENST00000576353 MSX1P28360 303 aa21.32■■□□□ 1
SNF8-217ENST00000576353 CHI3L1P36222 383 aaPredicted RBP21.32■■□□□ 1
SNF8-217ENST00000576353 IDH3AP50213 366 aa21.32■■□□□ 1
SNF8-217ENST00000576353 RPS26P62854 115 aaKnown RBP21.32■■□□□ 1
SNF8-217ENST00000576353 MIER2Q8N344 545 aa21.32■■□□□ 1
SNF8-217ENST00000576353 NEURL3Q96EH8 262 aa21.32■■□□□ 1
SNF8-217ENST00000576353 SLC35A5Q9BS91 424 aa21.32■■□□□ 1
SNF8-217ENST00000576353 EXD2Q9NVH0 621 aa21.32■■□□□ 1
SNF8-217ENST00000576353 ZNF446Q9NWS9 450 aa21.32■■□□□ 1
SNF8-217ENST00000576353 RPH3AQ9Y2J0 694 aaPredicted RBP21.32■■□□□ 1
SNF8-217ENST00000576353 PCNX1Q96RV3 2341 aa21.31■■□□□ 1
SNF8-217ENST00000576353 CCDC154A6NI56 674 aa21.31■■□□□ 1
SNF8-217ENST00000576353 HK1P19367 917 aa21.31■■□□□ 1
SNF8-217ENST00000576353 AQP5P55064 265 aa21.31■■□□□ 1
SNF8-217ENST00000576353 CDSNQ15517 529 aa21.31■■□□□ 1
SNF8-217ENST00000576353 GLYR1Q49A26 553 aaPredicted RBP21.31■■□□□ 1
SNF8-217ENST00000576353 ACSF3Q4G176 576 aaPredicted RBP21.31■■□□□ 1
SNF8-217ENST00000576353 DCST1Q5T197 706 aa21.31■■□□□ 1
SNF8-217ENST00000576353 SAXO2Q658L1 398 aa21.31■■□□□ 1
SNF8-217ENST00000576353 LILRB4Q8NHJ6 448 aa21.31■■□□□ 1
SNF8-217ENST00000576353 C1GALT1C1Q96EU7 318 aa21.31■■□□□ 1
SNF8-217ENST00000576353 SDF2Q99470 211 aa21.31■■□□□ 1
SNF8-217ENST00000576353 CCDC28BQ9BUN5 200 aa21.31■■□□□ 1
SNF8-217ENST00000576353 SERHL2Q9H4I8 314 aa21.31■■□□□ 1
SNF8-217ENST00000576353 NCOA6Q14686 2063 aaPredicted RBP21.3■■□□□ 1
SNF8-217ENST00000576353 LINC01387J3KSC0 135 aa21.3■■□□□ 1
SNF8-217ENST00000576353 DCTP40126 519 aa21.3■■□□□ 1
SNF8-217ENST00000576353 STX1BP61266 288 aa21.3■■□□□ 1
SNF8-217ENST00000576353 RCAN2Q14206 197 aa21.3■■□□□ 1
SNF8-217ENST00000576353 FLYWCH1Q4VC44 716 aa21.3■■□□□ 1
SNF8-217ENST00000576353 ATAD3BQ5T9A4 648 aa21.3■■□□□ 1
SNF8-217ENST00000576353 RIPPLY2Q5TAB7 128 aa21.3■■□□□ 1
SNF8-217ENST00000576353 ZNF621Q6ZSS3 439 aa21.3■■□□□ 1
SNF8-217ENST00000576353 MTERF4Q7Z6M4 381 aaKnown RBP21.3■■□□□ 1
SNF8-217ENST00000576353 LACC1Q8IV20 430 aa21.3■■□□□ 1
SNF8-217ENST00000576353 CCDC71Q8IV32 467 aaPredicted RBP21.3■■□□□ 1
SNF8-217ENST00000576353 GATSQ8NAP1 163 aa21.3■■□□□ 1
SNF8-217ENST00000576353 CHDHQ8NE62 594 aaPredicted RBP21.3■■□□□ 1
SNF8-217ENST00000576353 ZPLD1Q8TCW7 415 aa21.3■■□□□ 1
SNF8-217ENST00000576353 OR51I1Q9H343 314 aa21.3■■□□□ 1
SNF8-217ENST00000576353 RMND5AQ9H871 391 aa21.3■■□□□ 1
SNF8-217ENST00000576353 H3BNH8 94 aa21.29■■□□□ 1
SNF8-217ENST00000576353 TCEA1P23193 301 aaKnown RBP21.29■■□□□ 1
SNF8-217ENST00000576353 ZFP36L2P47974 494 aaKnown RBP21.29■■□□□ 1
SNF8-217ENST00000576353 ANXA11P50995 505 aaKnown RBP21.29■■□□□ 1
SNF8-217ENST00000576353 POLR2JP52435 117 aaKnown RBP21.29■■□□□ 1
SNF8-217ENST00000576353 ATP12AP54707 1039 aa21.29■■□□□ 1
SNF8-217ENST00000576353 B3GALT5-AS1P59052 145 aa21.29■■□□□ 1
SNF8-217ENST00000576353 BCL2A1Q16548 175 aa21.29■■□□□ 1
SNF8-217ENST00000576353 KLHL26Q53HC5 615 aa21.29■■□□□ 1
SNF8-217ENST00000576353 RAET1LQ5VY80 246 aa21.29■■□□□ 1
SNF8-217ENST00000576353 NSUN5P2Q63ZY6 315 aa21.29■■□□□ 1
SNF8-217ENST00000576353 MSANTD1Q6ZTZ1 278 aa21.29■■□□□ 1
SNF8-217ENST00000576353 C16orf62Q7Z3J2 963 aa21.29■■□□□ 1
SNF8-217ENST00000576353 PIGQQ9BRB3 760 aa21.29■■□□□ 1
SNF8-217ENST00000576353 INPP5KQ9BT40 448 aa21.29■■□□□ 1
SNF8-217ENST00000576353 CALHM2Q9HA72 323 aa21.29■■□□□ 1
SNF8-217ENST00000576353 A0A087WZY1 265 aa21.28■■□□□ 1
SNF8-217ENST00000576353 A0A0G2JNJ9 132 aa21.28■■□□□ 1
SNF8-217ENST00000576353 FAM234BA2RU67 622 aa21.28■■□□□ 1
SNF8-217ENST00000576353 CD8B2A6NJW9 211 aa21.28■■□□□ 1
SNF8-217ENST00000576353 HSPB2A8KAH6 182 aa21.28■■□□□ 1
SNF8-217ENST00000576353 H0Y3Z8 333 aa21.28■■□□□ 1
SNF8-217ENST00000576353 RFXANKO14593 260 aa21.28■■□□□ 1
SNF8-217ENST00000576353 STX11O75558 287 aa21.28■■□□□ 1
SNF8-217ENST00000576353 OR12D1P0DN82 309 aa21.28■■□□□ 1
SNF8-217ENST00000576353 GRNP28799 593 aaKnown RBP21.28■■□□□ 1
SNF8-217ENST00000576353 TIMP3P35625 211 aa21.28■■□□□ 1
SNF8-217ENST00000576353 MRPL19P49406 292 aaKnown RBP21.28■■□□□ 1
SNF8-217ENST00000576353 STARP49675 285 aa21.28■■□□□ 1
SNF8-217ENST00000576353 KHKP50053 298 aa21.28■■□□□ 1
SNF8-217ENST00000576353 LHX2P50458 406 aa21.28■■□□□ 1
SNF8-217ENST00000576353 TXNL4AP83876 142 aaKnown RBP21.28■■□□□ 1
SNF8-217ENST00000576353 SRYQ05066 204 aa21.28■■□□□ 1
SNF8-217ENST00000576353 HSPB2Q16082 182 aa21.28■■□□□ 1
SNF8-217ENST00000576353 ARHGAP11BQ3KRB8 267 aa21.28■■□□□ 1
SNF8-217ENST00000576353 XAGE5Q8WWM1 108 aa21.28■■□□□ 1
SNF8-217ENST00000576353 TRIB1Q96RU8 372 aa21.28■■□□□ 1
SNF8-217ENST00000576353 EBF4Q9BQW3 602 aa21.28■■□□□ 1
SNF8-217ENST00000576353 KCNJ16Q9NPI9 418 aa21.28■■□□□ 1
SNF8-217ENST00000576353 Q9UFV3 132 aa21.28■■□□□ 1
SNF8-217ENST00000576353 NUP214P35658 2090 aaPredicted RBP21.28■■□□□ 1
SNF8-217ENST00000576353 NPIPB9F8W1W9 429 aa21.27■■□□□ 1
SNF8-217ENST00000576353 GMFGO60234 142 aa21.27■■□□□ 1
SNF8-217ENST00000576353 PEPDP12955 493 aa21.27■■□□□ 1
SNF8-217ENST00000576353 ZNF708P17019 499 aa21.27■■□□□ 1
SNF8-217ENST00000576353 ADH7P40394 386 aa21.27■■□□□ 1
SNF8-217ENST00000576353 CASP9P55211 416 aa21.27■■□□□ 1
SNF8-217ENST00000576353 IRX1P78414 480 aaPredicted RBP21.27■■□□□ 1
SNF8-217ENST00000576353 CD226Q15762 336 aa21.27■■□□□ 1
SNF8-217ENST00000576353 HSP90B2PQ58FF3 399 aa21.27■■□□□ 1
SNF8-217ENST00000576353 ZNF787Q6DD87 383 aa21.27■■□□□ 1
SNF8-217ENST00000576353 HEPHL1Q6MZM0 1159 aa21.27■■□□□ 1
SNF8-217ENST00000576353 TNFAIP8L2Q6P589 184 aaPredicted RBP21.27■■□□□ 1
SNF8-217ENST00000576353 SEM1Q6ZVN7 128 aa21.27■■□□□ 1
SNF8-217ENST00000576353 ARFGAP2Q8N6H7 521 aa21.27■■□□□ 1
SNF8-217ENST00000576353 B4GALNT2Q8NHY0 566 aa21.27■■□□□ 1
SNF8-217ENST00000576353 PHOSPHO1Q8TCT1 267 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms