RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 FAM209AQ5JX71 171 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 CACUL1Q86Y37 369 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 GID4Q8IVV7 300 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 OR5H6Q8NGV6 325 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 CFHR5Q9BXR6 569 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 FOLH1BQ9HBA9 442 aa14.59□□□□□ -0.07
NUP88-207ENST00000573584 NOTCH4Q99466 2003 aa14.58□□□□□ -0.07
NUP88-207ENST00000573584 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 A0A0A6YYJ9 748 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 ANTXRLA6NF34 631 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 EIF4EP06730 217 aaKnown RBP14.58□□□□□ -0.08
NUP88-207ENST00000573584 TFPIP10646 304 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 DBPQ10586 325 aaPredicted RBP14.58□□□□□ -0.08
NUP88-207ENST00000573584 PUS10Q3MIT2 529 aaKnown RBP14.58□□□□□ -0.08
NUP88-207ENST00000573584 BCL2L15Q5TBC7 163 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 FAM205BPQ63HN1 556 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 CDC73Q6P1J9 531 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 SLC16A11Q8NCK7 471 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 GANCQ8TET4 914 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 PHF21AQ96BD5 680 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 RSPRY1Q96DX4 576 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 GIMAP5Q96F15 307 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 ZNF681Q96N22 645 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 TIMP4Q99727 224 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 C6orf106Q9H6K1 298 aaPredicted RBP14.58□□□□□ -0.08
NUP88-207ENST00000573584 SLC6A20Q9NP91 592 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 MRPS23Q9Y3D9 190 aaKnown RBP14.58□□□□□ -0.08
NUP88-207ENST00000573584 MYO7AQ13402 2215 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 DAPL1A0PJW8 107 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 OTOL1A6NHN0 477 aaPredicted RBP14.58□□□□□ -0.08
NUP88-207ENST00000573584 C1QTNF3-AMACRE9PGA6 284 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 PCDH8O95206 1070 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 PITPNBP48739 271 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 ARFIP1P53367 373 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 STXBP1P61764 594 aaKnown RBP14.58□□□□□ -0.08
NUP88-207ENST00000573584 PLA1AQ53H76 456 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 CEP78Q5JTW2 689 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 TMEM99Q8N816 258 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 MBNL1Q9NR56 388 aaKnown RBP14.58□□□□□ -0.08
NUP88-207ENST00000573584 KCNK6Q9Y257 313 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 RASD1Q9Y272 281 aa14.58□□□□□ -0.08
NUP88-207ENST00000573584 GSAPA4D1B5 854 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 FABP7O15540 132 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 TSC22D2O75157 780 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 ZGLP1P0C6A0 271 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 EPCAMP16422 314 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 F8A1P23610 371 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 ACSL1P33121 698 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 FAM27D1Q5T7N8 215 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 NIPAL3Q6P499 406 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 ARL9Q6T311 187 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 FRRS1Q6ZNA5 592 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 MEPCEQ7L2J0 689 aaKnown RBP14.57□□□□□ -0.08
NUP88-207ENST00000573584 KRT74Q7RTS7 529 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 OAFQ86UD1 273 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 FBXL6Q8N531 539 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 OR2L8Q8NGY9 312 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 OR5W2Q8NH69 310 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 SUSD6Q92537 303 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 RAB7BQ96AH8 199 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 HDAC8Q9BY41 377 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 MED28Q9H204 178 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 OR52D1Q9H346 318 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 TRIM36Q9NQ86 728 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 SLC23A1Q9UHI7 598 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 ZNF443Q9Y2A4 671 aaPredicted RBP14.57□□□□□ -0.08
NUP88-207ENST00000573584 DUXAA6NLW8 204 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 OR52A4PA6NMU1 304 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 EEF1E1O43324 174 aaKnown RBP14.57□□□□□ -0.08
NUP88-207ENST00000573584 HK1P19367 917 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 RFX3P48380 749 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 CLDN2P57739 230 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 ERVK-21P61565 698 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 FCN2Q15485 313 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 KLHL12Q53G59 568 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 TOR1AIP2Q8NFQ8 470 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 OR10H4Q8NGA5 316 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 CDS1Q92903 461 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 COL26A1Q96A83 441 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 KCTD12Q96CX2 325 aaKnown RBP14.57□□□□□ -0.08
NUP88-207ENST00000573584 C1QTNF2Q9BXJ5 285 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 DPH1Q9BZG8 443 aa14.57□□□□□ -0.08
NUP88-207ENST00000573584 MTHFD2LQ9H903 347 aaPredicted RBP14.57□□□□□ -0.08
NUP88-207ENST00000573584 KRCC1Q9NPI7 259 aaPredicted RBP14.57□□□□□ -0.08
NUP88-207ENST00000573584 CHP2O43745 196 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 NOS1APO75052 506 aaPredicted RBP14.56□□□□□ -0.08
NUP88-207ENST00000573584 FUT1P19526 365 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 TBXA2RP21731 343 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 AHCYP23526 432 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 PKLRP30613 574 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 OR10A3P58181 314 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 AGERQ15109 404 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 ANKRD54Q6NXT1 300 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 GPR135Q8IZ08 494 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 C9orf62Q8N4C0 152 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 SRFBP1Q8NEF9 429 aaKnown RBP14.56□□□□□ -0.08
NUP88-207ENST00000573584 ZNF296Q8WUU4 475 aaPredicted RBP14.56□□□□□ -0.08
NUP88-207ENST00000573584 WDR26Q9H7D7 661 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 SYNPO2LQ9H987 977 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 CACYBPQ9HB71 228 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms