RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 SLC23A2Q9UGH3 650 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 SNX7Q9UNH6 387 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 TMED5Q9Y3A6 229 aa6.59□□□□□ -1.35
CNOT1-222ENST00000570139 PRUNE2Q8WUY3 3088 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 A0A1W2PRV1 198 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 TMEM8BA6NDV4 472 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 BBIP1A8MTZ0 92 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 E9PBE3 544 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 DCXO43602 365 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 KLHL41O60662 606 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 OR4F21O95013 312 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 CSF2P04141 144 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 THRAP10827 490 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 CTSEP14091 401 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 ADRA2CP18825 462 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 NCF2P19878 526 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-222ENST00000570139 PKLRP30613 574 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 ACTR1BP42025 376 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 LIMK1P53667 647 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 ACTR1AP61163 376 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 ERVK-8P63133 956 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 ABATP80404 500 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 IRF8Q02556 426 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 MZT1Q08AG7 82 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 ACSM1Q08AH1 577 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 ELOCQ15369 112 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 IMPG1Q17R60 797 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 VWC2Q2TAL6 325 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 DNAL1Q4LDG9 190 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 ATP6AP1LQ52LC2 224 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 LCE4AQ5TA78 99 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 SHEQ5VZ18 495 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 CLEC6AQ6EIG7 209 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 HEPHL1Q6MZM0 1159 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 TEX38Q6PEX7 206 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 MBOAT1Q6ZNC8 495 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 LONP2Q86WA8 852 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 C17orf64Q86WR6 236 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 GKN2Q86XP6 184 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 TBC1D19Q8N5T2 526 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 NHLRC2Q8NBF2 726 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 TTLQ8NG68 377 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 OR5AR1Q8NGP9 310 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 OR2L8Q8NGY9 312 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 MAPK15Q8TD08 544 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 SLC5A11Q8WWX8 675 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 DNASE2BQ8WZ79 361 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 TUBGCP3Q96CW5 907 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 CXorf40BQ96DE9 158 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 PDXPQ96GD0 296 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 NSL1Q96IY1 281 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 SHCBP1LQ9BZQ2 653 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 B3GNT4Q9C0J1 378 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 NPFFR1Q9GZQ6 430 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 ATG10Q9H0Y0 220 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 C1orf21Q9H246 121 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 PPIL3Q9H2H8 161 aaKnown RBP6.58□□□□□ -1.36
CNOT1-222ENST00000570139 LRMDAQ9H2I8 198 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 ZNF385DQ9H6B1 395 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 CPNE5Q9HCH3 593 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 SPAG4Q9NPE6 437 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 CD93Q9NPY3 652 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 EQTNQ9NQ60 294 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 ACSS1Q9NUB1 689 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-222ENST00000570139 IMP3Q9NV31 184 aaKnown RBP6.58□□□□□ -1.36
CNOT1-222ENST00000570139 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.58□□□□□ -1.36
CNOT1-222ENST00000570139 OR6C2Q9NZP2 312 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 AKAP7Q9P0M2 348 aaPredicted RBP6.58□□□□□ -1.36
CNOT1-222ENST00000570139 KCNK6Q9Y257 313 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 SLC22A14Q9Y267 594 aa6.58□□□□□ -1.36
CNOT1-222ENST00000570139 F5P12259 2224 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 WIPF3A6NGB9 483 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 EIF4E1BA6NMX2 242 aaKnown RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 M0QZ24 198 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 MANBAO00462 879 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 SLC30A4O14863 429 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 NDUFS4O43181 175 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 DCNP07585 359 aaKnown RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 FAM58BPP0C7Q3 252 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 C1GALT1C1LP0DN25 315 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 PRPS2P11908 318 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 GNSP15586 552 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 XRCC1P18887 633 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 TSPAN8P19075 237 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 EPORP19235 508 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 MAOAP21397 527 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 SOAT1P35610 550 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 GDF5P43026 501 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 SNU13P55769 128 aaKnown RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 HNRNPH2P55795 449 aaKnown RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 HNRNPKP61978 463 aaKnown RBP eCLIP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 EMX2Q04743 252 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 SPOCK1Q08629 439 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 STX5Q13190 355 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 CHIT1Q13231 466 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 FZD2Q14332 565 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 GRB7Q14451 532 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 KIR2DS3Q14952 304 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 XKR6Q5GH73 641 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 COQ5Q5HYK3 327 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms