RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 CISD2Q8N5K1 135 aaKnown RBP16.43■□□□□ 0.22
COMMD4-222ENST00000568034 WDSUB1Q8N9V3 476 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 FAM98AQ8NCA5 519 aaKnown RBP16.43■□□□□ 0.22
COMMD4-222ENST00000568034 NFKBIDQ8NI38 313 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 SNRNP40Q96DI7 357 aaKnown RBP16.43■□□□□ 0.22
COMMD4-222ENST00000568034 ZNF597Q96LX8 424 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 ZNF583Q96ND8 569 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 TREX2Q9BQ50 279 aaPredicted RBP16.43■□□□□ 0.22
COMMD4-222ENST00000568034 HOXD1Q9GZZ0 328 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 BCL2L10Q9HD36 194 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 ZFP64Q9NPA5 681 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 ABCD2Q9UBJ2 740 aa16.43■□□□□ 0.22
COMMD4-222ENST00000568034 CFAP46Q8IYW2 2715 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 IGLV3-32A0A0A0MS00 114 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 CCT8L1PA6NM43 557 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 SCDO00767 359 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 ANGPTL1O95841 491 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 RFPL3SP0C7P2 107 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 ESRRAP11474 423 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-222ENST00000568034 CPOXP36551 454 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 SLC25A3Q00325 362 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 SCARB2Q14108 478 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 CYP51A1Q16850 503 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 ZNF630Q2M218 657 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-222ENST00000568034 PRAMEF8Q5VWM4 474 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 PRAMEF7Q5VXH5 474 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 TIGD3Q6B0B8 471 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 C6orf89Q6UWU4 347 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 METTL25Q8N6Q8 603 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 GATSQ8NAP1 163 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 RSPO3Q9BXY4 272 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-222ENST00000568034 TBL1XR1Q9BZK7 514 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 UBQLN3Q9H347 655 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 ZNF703Q9H7S9 590 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-222ENST00000568034 BOKQ9UMX3 212 aaPredicted RBP16.42■□□□□ 0.22
COMMD4-222ENST00000568034 DTNAQ9Y4J8 743 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 NCKAP5O14513 1909 aa16.42■□□□□ 0.22
COMMD4-222ENST00000568034 SHANK1Q9Y566 2161 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 AGAP5A6NIR3 686 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 FAM220BPB1ANY3 271 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 GNB5O14775 395 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 OIP5O43482 229 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 BCAS1O75363 584 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-222ENST00000568034 GCM2O75603 506 aaPredicted RBP16.41■□□□□ 0.22
COMMD4-222ENST00000568034 PGM3O95394 542 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 CALB2P22676 271 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 MST1P26927 711 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 MLLT10P55197 1068 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 PCBP3P57721 371 aaKnown RBP16.41■□□□□ 0.22
COMMD4-222ENST00000568034 RBBP4Q09028 425 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 PACS2Q86VP3 889 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 PGAM4Q8N0Y7 254 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 TMEM251Q8N6I4 163 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 FADS6Q8N9I5 356 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 C11orf65Q8NCR3 313 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 RBM15BQ8NDT2 890 aaKnown RBP16.41■□□□□ 0.22
COMMD4-222ENST00000568034 BBS10Q8TAM1 723 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 OIT3Q8WWZ8 545 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 REXO5Q96IC2 774 aaKnown RBP16.41■□□□□ 0.22
COMMD4-222ENST00000568034 KLHDC3Q9BQ90 382 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 ECSITQ9BQ95 431 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 SPATA9Q9BWV2 254 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 PIF1Q9H611 641 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 CALML5Q9NZT1 146 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 TMEM181Q9P2C4 612 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 SUCOQ9UBS9 1254 aaKnown RBP16.41■□□□□ 0.22
COMMD4-222ENST00000568034 FBXL2Q9UKC9 423 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 C15orf41Q9Y2V0 281 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 L3MBTL1Q9Y468 752 aa16.41■□□□□ 0.22
COMMD4-222ENST00000568034 A0A0G2JPF8 293 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 SERINC4A6NH21 518 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 CLDN24A6NM45 220 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 TTLL8A6PVC2 850 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 FAM166BA8MTA8 275 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 HNRNPCL2B2RXH8 293 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 HNRNPCL3B7ZW38 293 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 HNRNPCL1O60812 293 aaKnown RBP16.4■□□□□ 0.22
COMMD4-222ENST00000568034 HNRNPCL4P0DMR1 293 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 ZNF24P17028 368 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 PCGF2P35227 344 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 MASP1P48740 699 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 TDGF1P3P51864 188 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 FGFBP1Q14512 234 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 VMACQ2NL98 169 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 OR5M10Q6IEU7 315 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 REEP3Q6NUK4 255 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 RINLQ6ZS11 566 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 PLCZ1Q86YW0 608 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 ZNF527Q8NB42 609 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 HIPK4Q8NE63 616 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 OR2M3Q8NG83 312 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 NR4A3Q92570 626 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 PMM1Q92871 262 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 JSRP1Q96MG2 331 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-222ENST00000568034 GNRHR2Q96P88 292 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 ZDHHC11Q9H8X9 412 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 MTHFD2LQ9H903 347 aaPredicted RBP16.4■□□□□ 0.22
COMMD4-222ENST00000568034 ASF1BQ9NVP2 202 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 CHST2Q9Y4C5 530 aa16.4■□□□□ 0.22
COMMD4-222ENST00000568034 TMEM247A6NEH6 219 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms