RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 NFAT5O94916 1531 aa2.82□□□□□ -1.96
HERPUD1-212ENST00000567944 A0A0U1RRA0 63 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 TMEM89A2RUT3 159 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 KLLNB2CW77 178 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 PDLIM1O00151 329 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 LSM1O15116 133 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 ARPC1BO15143 372 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 RANBP6O60518 1105 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 NEBLO76041 1014 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 PNPP00491 289 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 S100A6P06703 90 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 HIST1H2AGP0C0S8 130 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 DUX4L4P0CJ87 422 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 TROVE2P10155 538 aaKnown RBP eCLIP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 LAMP1P11279 417 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 RPS2P15880 293 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 ZNF24P17028 368 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 KLK2P20151 261 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 IGFBP5P24593 272 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 MARCKSP29966 332 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 CCT6AP40227 531 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 MAGEA9P43362 315 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 NPY2RP49146 381 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 POU3F4P49335 361 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 FNTAP49354 379 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 MEOX2P50222 304 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 HNRNPFP52597 415 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 TPM4P67936 248 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 CBX1P83916 185 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 CCZ1BP86790 482 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 CCZ1P86791 482 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 GALK2Q01415 458 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 LRRC74AQ0VAA2 488 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 ZNF699Q32M78 642 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 C2orf76Q3KRA6 126 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 LRRC23Q53EV4 343 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 MS4A13Q5J8X5 152 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 DDI2Q5TDH0 399 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 MFSD7Q6UXD7 560 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 APOOLQ6UXV4 268 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 ADGRD2Q7Z7M1 963 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 SPC24Q8NBT2 197 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 CDKL2Q92772 493 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 HIST1H2ACQ93077 130 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 TMEM45BQ96B21 275 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 DEFB118Q96PH6 123 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 ATP6V0BQ99437 205 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 CAPS2Q9BXY5 557 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 NSRP1Q9H0G5 558 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 STMN4Q9H169 189 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 DBNDD1Q9H9R9 158 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 BATF3Q9NR55 127 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 NDUFA13Q9P0J0 144 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 HMG20BQ9P0W2 317 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 ERVK-18Q9QC07 812 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 ABCD2Q9UBJ2 740 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 MTRRQ9UBK8 725 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 TRIM10Q9UDY6 481 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 MIOXQ9UGB7 285 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 FAM153AQ9UHL3 310 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 PAIP2BQ9ULR5 123 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 NOSIPQ9Y314 301 aaKnown RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 ZNF175Q9Y473 711 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 RNF115Q9Y4L5 304 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 N6AMT1Q9Y5N5 214 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 MAPK8IP3Q9UPT6 1336 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 IBTKQ9P2D0 1353 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 PXDNLA1KZ92 1463 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 ZNF831Q5JPB2 1677 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 MON2Q7Z3U7 1717 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 DOT1LQ8TEK3 1739 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 RGPD2P0DJD1 1756 aa2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 N4BP2Q86UW6 1770 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 TNRC18O15417 2968 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-212ENST00000567944 KIAA0100Q14667 2235 aaKnown RBP2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 TRIM64A6NGJ6 449 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 FRG2CA6NGY1 282 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 TRIM64BA6NI03 449 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 M0QX08 132 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 TYROBPO43914 113 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 ATP6V1G1O75348 118 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 SYNGR4O95473 234 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 ECDO95905 644 aaPredicted RBP2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 APRTP07741 180 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 RPSAP08865 295 aaKnown RBP2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 HOXB7P09629 217 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 ZCCHC18P0CG32 403 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 ATP6V1B1P15313 513 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 CYP11B1P15538 503 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 GCFC2P16383 781 aaKnown RBP2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 HPDP32754 393 aaPredicted RBP2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 MDH2P40926 338 aaKnown RBP2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 SGSHP51688 502 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 SRP54P61011 504 aaKnown RBP2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 DR1Q01658 176 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 CNPY1Q3B7I2 92 aa2.8□□□□□ -1.96
HERPUD1-212ENST00000567944 CCDC14Q49A88 953 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms